myRT

myRT report for GCA_001931035.1_ASM193103v1

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Seq: LQGG01000009.1 Histophilus somni strain 3692HS isolate swab isolate 1 contig_9, whole genome shotgun sequence (111280 bp)
Overview 1 RT 1: 10365-17571 bp Neighborhood of RT #1 [10365, 17573] gapA RVT_N RVT-GII GIIM HNHc nrdG PRK09263 Feature: gene Location: 10365-11369 bp Feature: domain Description: gapA Location: 10368-11352 bp Feature: domain Description: gapA Location: 1 0368-1 1 352 bp Feature: gene Location: 12584-12841 bp Feature: gene Location: 12964-14691 bp Feature: RT Description: RVT_N Location: 13039-13282 bp Feature: RT Description: RVT_N Location: 1 3039-1 3282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13327-13987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3327-1 3987 bp Feature: domain Description: GIIM Note: maturase Location: 14041-14272 bp Feature: domain Description: GIIM Note: maturase Location: 1 4041 -1 4272 bp Feature: domain Description: HNHc Note: nucleases Location: 14497-14656 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4497-1 4656 bp Feature: gene Location: 14964-15431 bp Feature: domain Description: nrdG Location: 14967-15426 bp Feature: domain Description: nrdG Location: 1 4967-1 5426 bp Feature: gene Location: 15447-17573 bp Feature: domain Description: PRK09263 Location: 15462-17571 bp Feature: domain Description: PRK09263 Location: 1 5462-1 7571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gapA (PRK15425), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), nrdG (PRK11121), PRK09263 (anaerobic ribonucleoside triphosphate reductase; Provisional)