myRT

myRT report for GCA_001931045.1_ASM193104v1

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Seq: LQGH01000059.1 Histophilus somni strain 3758HS isolate swab isolate 1 contig_59, whole genome shotgun sequence (111334 bp)
Overview 1 RT 1: 10325-17531 bp Neighborhood of RT #1 [10325, 17533] gapA RVT_N RVT-GII GIIM HNHc nrdG PRK09263 Feature: gene Location: 10325-11329 bp Feature: domain Description: gapA Location: 10328-11312 bp Feature: domain Description: gapA Location: 1 0328-1 1 31 2 bp Feature: gene Location: 12544-12801 bp Feature: gene Location: 12924-14651 bp Feature: RT Description: RVT_N Location: 12999-13242 bp Feature: RT Description: RVT_N Location: 1 2999-1 3242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13287-13947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3287-1 3947 bp Feature: domain Description: GIIM Note: maturase Location: 14001-14232 bp Feature: domain Description: GIIM Note: maturase Location: 1 4001 -1 4232 bp Feature: domain Description: HNHc Note: nucleases Location: 14457-14616 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4457-1 461 6 bp Feature: gene Location: 14924-15391 bp Feature: domain Description: nrdG Location: 14927-15386 bp Feature: domain Description: nrdG Location: 1 4927-1 5386 bp Feature: gene Location: 15407-17533 bp Feature: domain Description: PRK09263 Location: 15422-17531 bp Feature: domain Description: PRK09263 Location: 1 5422-1 7531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gapA (PRK15425), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), nrdG (PRK11121), PRK09263 (anaerobic ribonucleoside triphosphate reductase; Provisional)