myRT

myRT report for GCA_001931485.1_ASM193148v1

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Seq: MSDV01000046.1 Burkholderia sp. SRS-W-2-2016 contig8255, whole genome shotgun sequence (321386 bp)
Overview 1 RT 1: 120716-126453 bp Neighborhood of RT #1 [120716, 126656] NTP-PPase_RS21-C6_like PglL_A Wzy_C Wzy_C_2 RVT_N RVT-GII GIIM HNH PilA Feature: gene Location: 120716-121066 bp Ori: OLL29776.1 Feature: domain Description: NTP-PPase_RS21-C6_like Location: 120743-121007 bp Feature: domain Description: NTP-PPase_RS21 -C6_like Location: 1 20743-1 21 007 bp Feature: gene Location: 121108-122898 bp Ori: OLL29777.1 Feature: domain Description: PglL_A Location: 121615-121687 bp Feature: domain Description: PglL_A Location: 1 21 61 5-1 21 687 bp Feature: domain Description: Wzy_C Location: 121729-122197 bp Feature: domain Description: Wzy_C Location: 1 21 729-1 221 97 bp Feature: domain Description: Wzy_C_2 Location: 122263-122764 bp Feature: domain Description: Wzy_C_2 Location: 1 22263-1 22764 bp Feature: gene Location: 123026-124732 bp Ori: OLL29778.1 Feature: domain Description: RVT_N Location: 123083-123326 bp Feature: domain Description: RVT_N Location: 1 23083-1 23326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123371-124019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 23371 -1 2401 9 bp Feature: domain Description: GIIM Note: maturase Location: 124070-124304 bp Feature: domain Description: GIIM Note: maturase Location: 1 24070-1 24304 bp Feature: domain Description: HNH Note: nucleases Location: 124556-124688 bp Feature: domain Description: HNH Note: nucleases Location: 1 24556-1 24688 bp Feature: gene Location: 124861-125181 bp Feature: gene Location: 126033-126656 bp Ori: OLL29779.1 Feature: domain Description: PilA Location: 126153-126453 bp Feature: domain Description: PilA Location: 1 261 53-1 26453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_RS21-C6_like (cd11537), PglL_A (pfam15864), Wzy_C (pfam04932), Wzy_C_2 (pfam11846), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PilA (COG4969)

Seq: MSDV01000016.1 Burkholderia sp. SRS-W-2-2016 contig117049, whole genome shotgun sequence (63396 bp)
Overview 1 RT 1: 4758-10796 bp Neighborhood of RT #1 [4758, 10846] ilvH PRK05479 RVT_N RVT-GII GIIM HNHc PRK05305 PssA Feature: gene Location: 4758-5249 bp Ori: OLL32724.1 Feature: domain Description: ilvH Location: 4761-5238 bp Feature: domain Description: ilvH Location: 4761-52 38 bp Feature: gene Location: 5358-6374 bp Ori: OLL32725.1 Feature: domain Description: PRK05479 Location: 5361-6342 bp Feature: domain Description: PRK05479 Location: 5361-6342 bp Feature: gene Location: 7492-9192 bp Ori: OLL32726.1 Feature: domain Description: RVT_N Location: 7549-7792 bp Feature: domain Description: RVT_N Location: 7549-7792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7837-8485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7837-8485 bp Feature: domain Description: GIIM Note: maturase Location: 8536-8770 bp Feature: domain Description: GIIM Note: maturase Location: 8536-8770 bp Feature: domain Description: HNHc Note: nucleases Location: 9013-9154 bp Feature: domain Description: HNHc Note: nucleases Location: 9013-9154 bp Feature: gene Location: 9311-9949 bp Ori: OLL32727.1 Feature: domain Description: PRK05305 Location: 9335-9944 bp Feature: domain Description: PRK05305 Location: 9335-9944 bp Feature: gene Location: 9974-10846 bp Ori: OLL32728.1 Feature: domain Description: PssA Location: 10109-10796 bp Feature: domain Description: PssA Location: 10109-10796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ilvH (PRK11895), PRK05479 (ketol-acid reductoisomerase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05305 (phosphatidylserine decarboxylase family protein), PssA (COG1183)

Seq: MSDV01000062.1 Burkholderia sp. SRS-W-2-2016 contig89277, whole genome shotgun sequence (100823 bp)
Overview 1 RT 1: 63827-72604 bp Neighborhood of RT #1 [63827, 72618] PRK12939 RIP RVT-UG5 GatA LysR Feature: gene Location: 63827-64621 bp Ori: OLL28603.1 Feature: domain Description: PRK12939 Location: 63887-64616 bp Feature: domain Description: PRK1293 9 Location: 63 887-64616 bp Feature: gene Location: 65601-66317 bp Ori: OLL28604.1 Feature: domain Description: RIP Location: 65871-66144 bp Feature: domain Description: RIP Location: 65871-66144 bp Feature: gene Location: 66369-69395 bp Ori: OLL28605.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66867-67356 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66867-673 56 bp Feature: gene Location: 70089-71567 bp Ori: OLL28606.1 Feature: domain Description: GatA Location: 70104-71514 bp Feature: domain Description: GatA Location: 70104-71514 bp Feature: gene Location: 71710-72618 bp Ori: OLL28607.1 Feature: domain Description: LysR Location: 71722-72604 bp Feature: domain Description: LysR Location: 71722-72604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12939 (short chain dehydrogenase; Provisional), RIP (pfam00161), RVT-UG5, GatA (COG0154), LysR (COG0583)