myRT

myRT report for GCA_001931705.1_ASM193170v1

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Seq: MPSJ01000026.1 Klebsiella pneumoniae strain 38_wz Contig_26, whole genome shotgun sequence (67093 bp)
Overview 1 RT 1: 13835-22282 bp Neighborhood of RT #1 [13835, 22287] HTH_28 RVT-Retrons MalT AcoA Feature: gene Location: 13835-14629 bp Feature: gene Location: 14687-15220 bp Ori: OLL60078.1 Feature: domain Description: HTH_28 Location: 14714-14762 bp Feature: domain Description: HTH_28 Location: 1 471 4-1 4762 bp Feature: gene Location: 15904-17739 bp Ori: OLL60079.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16039-16738 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6039-1 6738 bp Feature: gene Location: 18307-21072 bp Ori: OLL60080.1 Feature: domain Description: MalT Location: 18382-21067 bp Feature: domain Description: MalT Location: 1 8382-21 067 bp Feature: gene Location: 21328-22287 bp Ori: OLL60081.1 Feature: domain Description: AcoA Location: 21334-22282 bp Feature: domain Description: AcoA Location: 21 334-22282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), RVT-Retrons, MalT (COG2909), AcoA (COG1071)

Seq: MPSJ01000029.1 Klebsiella pneumoniae strain 38_wz Contig_29, whole genome shotgun sequence (48552 bp)
Overview 1 RT 1: 37361-45025 bp Neighborhood of RT #1 [37361, 45057] RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like PRK04247 RVT-UG5 IncA Peptidase_M78 Feature: gene Location: 37361-39079 bp Ori: OLL59913.1 Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 37688-38222 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 37688-382 2 2 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 38672-39050 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 38672 -39050 bp Feature: gene Location: 39090-40190 bp Ori: OLL59914.1 Feature: domain Description: PRK04247 Location: 39153-39384 bp Feature: domain Description: PRK042 47 Location: 39153-39384 bp Feature: gene Location: 40370-43387 bp Ori: OLL59915.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 40868-41363 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 40868-41363 bp Feature: gene Location: 43835-44509 bp Ori: OLL59916.1 Feature: domain Description: IncA Location: 44126-44468 bp Feature: domain Description: IncA Location: 4412 6-44468 bp Feature: gene Location: 44512-45057 bp Ori: OLL59917.1 Feature: domain Description: Peptidase_M78 Location: 44662-45025 bp Feature: domain Description: Peptidase_M78 Location: 44662 -4502 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293), PRK04247 (endonuclease NucS), RVT-UG5, IncA, Peptidase_M78 (pfam06114)