myRT

myRT report for GCA_001936615.1_ASM193661v1

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Seq: MLBF01000008.1 Desulfosporosinus sp. OL contig00008, whole genome shotgun sequence (142090 bp)
Overview 1 RT 1: 3711-9895 bp Neighborhood of RT #1 [3711, 9957] DUF1837 RVT-GII HNHc xerC CxxCG_CxxCG_HTH DUF4065 Feature: gene Location: 3711-4655 bp Ori: OLN32458.1 Feature: domain Description: DUF1837 Location: 3924-4491 bp Feature: domain Description: DUF1 837 Location: 3924-4491 bp Feature: gene Location: 5471-5608 bp Feature: gene Location: 5818-7671 bp Ori: OLN32460.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6136-6844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 36-6844 bp Feature: domain Description: HNHc Note: nucleases Location: 7423-7552 bp Feature: domain Description: HNHc Note: nucleases Location: 7423-7552 bp Feature: gene Location: 7837-8664 bp Ori: OLN32461.1 Feature: domain Description: xerC Location: 7876-8650 bp Feature: domain Description: xerC Location: 7876-8650 bp Feature: gene Location: 8914-9957 bp Ori: OLN32462.1 Feature: domain Description: CxxCG_CxxCG_HTH Location: 8956-9325 bp Feature: domain Description: CxxCG_CxxCG_HTH Location: 8956-9325 bp Feature: domain Description: DUF4065 Location: 9580-9895 bp Feature: domain Description: DUF4065 Location: 9580-9895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), RVT-GII, HNHc (smart00507), xerC (PRK01287), CxxCG_CxxCG_HTH (TIGR03830), DUF4065 (pfam13274)

Seq: MLBF01000062.1 Desulfosporosinus sp. OL contig00062, whole genome shotgun sequence (23840 bp)
Overview 1 RT 1: 811-6324 bp Neighborhood of RT #1 [811, 6611] RVT-GII RVT-GII RVT-GII PRK13531 Feature: gene Location: 811-963 bp Feature: gene Location: 1046-2050 bp Ori: OLN27149.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1250-1907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 50-1907 bp Feature: gene Location: 2106-2219 bp Feature: gene Location: 2539-3288 bp Ori: OLN27151.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2743-3229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 743-32 2 9 bp Feature: gene Location: 3276-3887 bp Feature: gene Location: 3967-4710 bp Ori: OLN27153.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4291-4672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 91-4672 bp Feature: gene Location: 4903-5094 bp Feature: gene Location: 5562-6611 bp Ori: OLN27155.1 Feature: domain Description: PRK13531 Location: 5568-6324 bp Feature: domain Description: PRK13531 Location: 5568-632 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK13531 (regulatory ATPase RavA; Provisional)

Seq: MLBF01000025.1 Desulfosporosinus sp. OL contig00025, whole genome shotgun sequence (60120 bp)
Overview 1 RT 1: 16164-22059 bp Neighborhood of RT #1 [16164, 22067] sbcd sbcd PhnB RVT-GII GIIM LPLAT_AGPAT-like PRK05254 Feature: gene Location: 16164-17486 bp Ori: OLN30332.1 Feature: domain Description: sbcd Location: 16167-16512 bp Feature: domain Description: sbcd Location: 16167-16512 bp Feature: domain Description: sbcd Location: 16587-16986 bp Feature: domain Description: sbcd Location: 16587-16986 bp Feature: gene Location: 17692-18111 bp Ori: OLN30333.1 Feature: domain Description: PhnB Location: 17707-18106 bp Feature: domain Description: PhnB Location: 17707-18106 bp Feature: gene Location: 18209-19639 bp Ori: OLN30334.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18575-19196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18575-19196 bp Feature: domain Description: GIIM Note: maturase Location: 19247-19457 bp Feature: domain Description: GIIM Note: maturase Location: 19247-19457 bp Feature: gene Location: 20311-21099 bp Ori: OLN30335.1 Feature: domain Description: LPLAT_AGPAT-like Location: 20527-21043 bp Feature: domain Description: LPLAT_AGPAT-like Location: 20527-21043 bp Feature: gene Location: 21402-22067 bp Ori: OLN30336.1 Feature: domain Description: PRK05254 Location: 21411-22059 bp Feature: domain Description: PRK05254 Location: 21411-22059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sbcd (TIGR00619), PhnB (COG2764), RVT-GII, GIIM (pfam08388), LPLAT_AGPAT-like (cd07989), PRK05254 (uracil-DNA glycosylase; Provisional)

Seq: MLBF01000005.1 Desulfosporosinus sp. OL contig00005, whole genome shotgun sequence (160733 bp)
Overview 1 RT 1: 152242-158709 bp Neighborhood of RT #1 [152242, 158709] Phage_int_SAM_1 INT_RitB_C_like INT_RitA_C_like RVT-GII GIIM DUF3846 Feature: gene Location: 152242-153192 bp Ori: OLN33068.1 Feature: domain Description: Phage_int_SAM_1 Location: 152302-152482 bp Feature: domain Description: Phage_int_SAM_1 Location: 152302-1524 82 bp Feature: domain Description: INT_RitB_C_like Location: 152560-153118 bp Feature: domain Description: INT_RitB_C_like Location: 152560-153118 bp Feature: gene Location: 153189-154421 bp Ori: OLN33069.1 Feature: domain Description: INT_RitA_C_like Location: 153849-154386 bp Feature: domain Description: INT_RitA_C_like Location: 15384 9-154 386 bp Feature: gene Location: 154624-156051 bp Ori: OLN33070.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154990-155608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154 990-155608 bp Feature: domain Description: GIIM Note: maturase Location: 155659-155869 bp Feature: domain Description: GIIM Note: maturase Location: 155659-155869 bp Feature: gene Location: 156504-156956 bp Ori: OLN33071.1 Feature: domain Description: DUF3846 Location: 156540-156795 bp Feature: domain Description: DUF384 6 Location: 15654 0-156795 bp Feature: gene Location: 156982-158709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188), RVT-GII, GIIM (pfam08388), DUF3846 (pfam12957)

Seq: MLBF01000142.1 Desulfosporosinus sp. OL contig00142, whole genome shotgun sequence (1684 bp)
Overview 1 RT 1: 72-1371 bp Neighborhood of RT #1 [72, 1430] RVT-GII matK HNHc Feature: gene Location: 72-1430 bp Ori: OLN25013.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78-681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78-681 bp Feature: domain Description: matK Location: 786-1014 bp Feature: domain Description: matK Location: 786-1014 bp Feature: domain Description: HNHc Note: nucleases Location: 1215-1371 bp Feature: domain Description: HNHc Note: nucleases Location: 1215 -1371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, matK (CHL00002), HNHc (smart00507)

Seq: MLBF01000111.1 Desulfosporosinus sp. OL contig00111, whole genome shotgun sequence (4606 bp)
Overview 1 RT 1: 651-3965 bp Neighborhood of RT #1 [651, 3965] RVT-GII GIIM Feature: gene Location: 651-779 bp Feature: gene Location: 810-2054 bp Ori: OLN25521.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014-1671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014-16 71 bp Feature: domain Description: GIIM Note: maturase Location: 1752-1965 bp Feature: domain Description: GIIM Note: maturase Location: 1752-196 5 bp Feature: gene Location: 2248-2373 bp Feature: gene Location: 2742-3965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MLBF01000133.1 Desulfosporosinus sp. OL contig00133, whole genome shotgun sequence (2108 bp)
Overview 1 RT 1: 141-1887 bp Neighborhood of RT #1 [141, 1994] RVT-GII HNHc Feature: gene Location: 141-1994 bp Ori: OLN25151.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1167 bp Feature: domain Description: HNHc Note: nucleases Location: 1719-1887 bp Feature: domain Description: HNHc Note: nucleases Location: 17 19-1887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MLBF01000017.1 Desulfosporosinus sp. OL contig00017, whole genome shotgun sequence (73049 bp)
Overview 1 RT 1: 66418-71563 bp Neighborhood of RT #1 [66418, 71595] LrgB RVT-GII GIIM GH20_GcnA-like BcsQ Feature: gene Location: 66418-66624 bp Ori: OLN31563.1 Feature: domain Description: LrgB Location: 66433-66616 bp Feature: domain Description: LrgB Location: 66433-66616 bp Feature: gene Location: 66667-67932 bp Feature: gene Location: 68066-69268 bp Ori: OLN31565.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68213-68906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68 213-68 906 bp Feature: domain Description: GIIM Note: maturase Location: 68972-69179 bp Feature: domain Description: GIIM Note: maturase Location: 68 972-69179 bp Feature: gene Location: 69969-70454 bp Ori: OLN31566.1 Feature: domain Description: GH20_GcnA-like Location: 69972-70311 bp Feature: domain Description: GH20_GcnA-like Location: 69972-70311 bp Feature: gene Location: 70786-71595 bp Ori: OLN31567.1 Feature: domain Description: BcsQ Location: 70837-71563 bp Feature: domain Description: BcsQ Location: 708 37-71563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LrgB (pfam04172), RVT-GII, GIIM (pfam08388), GH20_GcnA-like (cd06565), BcsQ (COG1192)

Seq: MLBF01000049.1 Desulfosporosinus sp. OL contig00049, whole genome shotgun sequence (29954 bp)
Overview 1 RT 1: 202-8265 bp Neighborhood of RT #1 [202, 8267] fabG RVT-GII RVT-GII GIIM RVT-GII RVT-GII SSL2 DUF3427 Feature: gene Location: 202-942 bp Ori: OLN27927.1 Feature: domain Description: fabG Location: 208-937 bp Feature: domain Description: fabG Location: 208-9 37 bp Feature: gene Location: 2147-2899 bp Ori: OLN27928.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2513-2894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2513-289 4 bp Feature: gene Location: 3231-3887 bp Ori: OLN27929.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3234-3444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3234-3444 bp Feature: domain Description: GIIM Note: maturase Location: 3495-3708 bp Feature: domain Description: GIIM Note: maturase Location: 349 5-3708 bp Feature: gene Location: 4162-4281 bp Feature: gene Location: 4468-5121 bp Ori: OLN27931.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4723-5080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4723-5080 bp Feature: gene Location: 5115-5783 bp Ori: OLN27932.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5118-5409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5118-5409 bp Feature: gene Location: 6172-7578 bp Ori: OLN27933.1 Feature: domain Description: SSL2 Location: 6199-7288 bp Feature: domain Description: SSL2 Location: 619 9 -7288 bp Feature: gene Location: 7842-8267 bp Ori: OLN27934.1 Feature: domain Description: DUF3427 Location: 7938-8265 bp Feature: domain Description: DUF3427 Location: 79 38-8265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fabG (PRK12825), RVT-GII, GIIM (pfam08388), SSL2 (COG1061), DUF3427 (pfam11907)