myRT

myRT report for GCA_001936705.1_UCI09_v1.0

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Seq: LKZA01000042.1 Staphylococcus aureus strain UCI 9 UCI09_c3, whole genome shotgun sequence (215390 bp)
Overview 1 RT 1: 1-4517 bp Neighborhood of RT #1 [1, 4517] PRK08617 RVT-Retrons Feature: gene Location: 1-730 bp Feature: domain Description: PRK08617 Location: 10-730 bp Feature: domain Description: PRK0861 7 Location: 1 0-730 bp Feature: gene Location: 1224-1406 bp Feature: gene Location: 1980-2996 bp Ori: OLN41031.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2130-2667 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 30-2667 bp Feature: gene Location: 3241-3870 bp Feature: gene Location: 3870-4517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: LKZA01000026.1 Staphylococcus aureus strain UCI 9 plasmid unnamed3 UCI09_c165, whole genome shotgun sequence (23738 bp)
Overview 1 RT 1: 309-6262 bp Neighborhood of RT #1 [309, 6288] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 309-917 bp Feature: gene Location: 1457-2047 bp Ori: OLN42308.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1931-2030 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1931-2 030 bp Feature: gene Location: 2134-3225 bp Ori: OLN42309.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2137-2317 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2 137-2 317 bp Feature: gene Location: 3579-4424 bp Ori: OLN42310.1 Feature: domain Description: PenP Location: 3591-4416 bp Feature: domain Description: PenP Location: 3591-4416 bp Feature: gene Location: 4531-6288 bp Ori: OLN42311.1 Feature: domain Description: MecR1 Location: 4534-5563 bp Feature: domain Description: MecR1 Location: 4534-5563 bp Feature: domain Description: Transpeptidase Location: 5617-6262 bp Feature: domain Description: Transpeptidase Location: 5617-62 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)