myRT

myRT report for GCA_001937255.1_ASM193725v1

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Seq: LAZA01000105.1 Escherichia coli strain R7AC NODE_42, whole genome shotgun sequence (33115 bp)
Overview 1 RT 1: 21720-27976 bp Neighborhood of RT #1 [21720, 28026] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 RVT-GII fecB fecB Feature: gene Location: 21720-23312 bp Ori: OLN77391.1 Feature: domain Description: LZ_Tnp_IS66 Location: 21879-22089 bp Feature: domain Description: LZ_Tnp_IS66 Location: 21 879-22089 bp Feature: domain Description: zf-IS66 Location: 22113-22245 bp Feature: domain Description: zf-IS66 Location: 221 1 3-22245 bp Feature: domain Description: DDE_Tnp_IS66 Location: 22290-23157 bp Feature: domain Description: DDE_Tnp_IS66 Location: 22290-231 57 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 23181-23289 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 231 81 -23289 bp Feature: gene Location: 23343-23528 bp Ori: OLN77392.1 Feature: domain Description: TnpB_IS66 Location: 23346-23496 bp Feature: domain Description: TnpB_IS66 Location: 23346-23496 bp Feature: gene Location: 25021-26355 bp Ori: OLN77400.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25306-25993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25306-25993 bp Feature: gene Location: 27303-27743 bp Ori: OLN77393.1 Feature: domain Description: fecB Location: 27306-27732 bp Feature: domain Description: fecB Location: 27306-27732 bp Feature: gene Location: 27817-28026 bp Ori: OLN77394.1 Feature: domain Description: fecB Location: 27838-27976 bp Feature: domain Description: fecB Location: 27838-27976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), RVT-GII, fecB (PRK11411)

Seq: LAZA01000071.1 Escherichia coli strain R7AC NODE_51, whole genome shotgun sequence (21644 bp)
Overview 1 RT 1: 14649-20491 bp Neighborhood of RT #1 [14649, 20526] DUF5339 Asparaginase_2 RVT-GII DcuC PRK13381 Feature: gene Location: 14649-14927 bp Ori: OLN78916.1 Feature: domain Description: DUF5339 Location: 14712-14913 bp Feature: domain Description: DUF5339 Location: 14712 -14913 bp Feature: gene Location: 15265-16287 bp Ori: OLN78923.1 Feature: domain Description: Asparaginase_2 Location: 15346-16279 bp Feature: domain Description: Asparaginase_2 Location: 15346-162 79 bp Feature: gene Location: 16820-17266 bp Ori: OLN78917.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17126-17228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1712 6-172 2 8 bp Feature: gene Location: 17912-19273 bp Ori: OLN78918.1 Feature: domain Description: DcuC Location: 17915-19247 bp Feature: domain Description: DcuC Location: 17915-192 47 bp Feature: gene Location: 19270-20526 bp Ori: OLN78919.1 Feature: domain Description: PRK13381 Location: 19276-20491 bp Feature: domain Description: PRK13381 Location: 192 76-2 0491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5339 (pfam17274), Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771), PRK13381 (peptidase T; Provisional)

Seq: LAZA01000113.1 Escherichia coli strain R7AC NODE_39, whole genome shotgun sequence (36109 bp)
Overview 1 RT 1: 16381-22121 bp Neighborhood of RT #1 [16381, 22279] InsG Transposase_20 RVT-GII GIIM YcaC_related Feature: gene Location: 16381-16560 bp Feature: gene Location: 16557-17948 bp Ori: OLN77172.1 Feature: domain Description: InsG Location: 16560-17481 bp Feature: domain Description: InsG Location: 16560-17481 bp Feature: domain Description: Transposase_20 Location: 17604-17850 bp Feature: domain Description: Transposase_20 Location: 17604-17850 bp Feature: gene Location: 18335-19723 bp Ori: OLN77173.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18665-19283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18665-19283 bp Feature: domain Description: GIIM Note: maturase Location: 19331-19562 bp Feature: domain Description: GIIM Note: maturase Location: 193 3 1-19562 bp Feature: gene Location: 20651-21262 bp Feature: gene Location: 21599-22279 bp Ori: OLN77175.1 Feature: domain Description: YcaC_related Location: 21644-22121 bp Feature: domain Description: YcaC_related Location: 21644-22121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsG (COG3385), Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), YcaC_related (cd01012)

Seq: LAZA01000115.1 Escherichia coli strain R7AC NODE_52, whole genome shotgun sequence (14126 bp)
Overview 1 RT 1: 2353-6878 bp Neighborhood of RT #1 [2353, 6901] FHA_bHelix Fil_haemagg FHA_bHelix RVT-GII PHA02517 HTH_23 InsE Feature: gene Location: 2353-3456 bp Ori: OLN77147.1 Feature: domain Description: FHA_bHelix Location: 2365-2725 bp Feature: domain Description: FHA_bHelix Location: 2365-2725 bp Feature: domain Description: Fil_haemagg Location: 2818-3040 bp Feature: domain Description: Fil_haemagg Location: 2818-304 0 bp Feature: domain Description: FHA_bHelix Location: 3319-3427 bp Feature: domain Description: FHA_bHelix Location: 3319-34 27 bp Feature: gene Location: 3431-3721 bp Feature: gene Location: 4895-5269 bp Ori: OLN77149.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4901-5072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 901-5072 bp Feature: gene Location: 5664-5912 bp Ori: OLN77150.1 Feature: domain Description: PHA02517 Location: 5673-5856 bp Feature: domain Description: PHA02517 Location: 5673-5856 bp Feature: gene Location: 6251-6901 bp Ori: OLN77151.1 Feature: domain Description: HTH_23 Location: 6302-6401 bp Feature: domain Description: HTH_23 Location: 6302-64 01 bp Feature: domain Description: InsE Location: 6527-6878 bp Feature: domain Description: InsE Location: 6527-6878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FHA_bHelix (sd00046), Fil_haemagg (pfam05594), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), HTH_23 (pfam13384), InsE (COG2963)