myRT

myRT report for GCA_001937775.1_ASM193777v1

Download annotations/find similar RTs

Seq: MRUF01000040.1 Bacillus megaterium strain MRML4 scaffold_39, whole genome shotgun sequence (13945 bp)
Overview 1 RT 1: 9633-13924 bp Neighborhood of RT #1 [9633, 13945] SASP DUF3231 RVT_N RVT-GII HTH_Tnp_1 Feature: gene Location: 9633-9842 bp Ori: OLO25143.1 Feature: domain Description: SASP Location: 9663-9825 bp Feature: domain Description: SASP Location: 9663-9825 bp Feature: gene Location: 10174-10686 bp Ori: OLO25144.1 Feature: domain Description: DUF3231 Location: 10180-10675 bp Feature: domain Description: DUF3231 Location: 1 01 80-1 0675 bp Feature: gene Location: 11689-13337 bp Feature: domain Description: RVT_N Location: 11737-11983 bp Feature: domain Description: RVT_N Location: 1 1 737-1 1 983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12037-12421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2037-1 2421 bp Feature: gene Location: 13774-13945 bp Ori: OLO25145.1 Feature: domain Description: HTH_Tnp_1 Location: 13798-13924 bp Feature: domain Description: HTH_Tnp_1 Location: 1 3798-1 3924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SASP (pfam00269), DUF3231 (pfam11553), RVT_N (pfam13655), RVT-GII, HTH_Tnp_1 (pfam01527)

Seq: MRUF01000025.1 Bacillus megaterium strain MRML4 scaffold_24, whole genome shotgun sequence (25371 bp)
Overview 1 RT 1: 21439-25371 bp Neighborhood of RT #1 [21439, 25371] RVT_N RVT-GII YkfC HNHc Feature: gene Location: 21439-21918 bp Feature: gene Location: 21966-22244 bp Feature: gene Location: 23085-24884 bp Ori: OLO26303.1 Feature: domain Description: RVT_N Location: 23148-23385 bp Feature: domain Description: RVT_N Location: 2 3148-2 3385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23442-24111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3442 -2 4111 bp Feature: domain Description: YkfC Location: 24267-24417 bp Feature: domain Description: YkfC Location: 2 42 67-2 4417 bp Feature: domain Description: HNHc Note: nucleases Location: 24621-24783 bp Feature: domain Description: HNHc Note: nucleases Location: 2 462 1-2 4783 bp Feature: gene Location: 25140-25371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: MRUF01000026.1 Bacillus megaterium strain MRML4 scaffold_25, whole genome shotgun sequence (24895 bp)
Overview 1 RT 1: 20063-24895 bp Neighborhood of RT #1 [20063, 24895] DNA_S_dndA RVT-UG12 Feature: gene Location: 20063-21181 bp Ori: OLO26233.1 Feature: domain Description: DNA_S_dndA Location: 20072-21134 bp Feature: domain Description: DNA_S_dndA Location: 20072-2113 4 bp Feature: gene Location: 21665-22783 bp Feature: gene Location: 22918-24504 bp Ori: OLO26235.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 23269-23710 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 23 269-23 710 bp Feature: gene Location: 24655-24895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_S_dndA (TIGR03235), RVT-UG12