myRT

myRT report for GCA_001939735.1_ASM193973v1

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Seq: MJIL01000016.1 Photobacterium proteolyticum strain 13-12 C1759, whole genome shotgun sequence (2072 bp)
Overview 1 RT 1: 19-1267 bp Neighborhood of RT #1 [19, 1491] RVT_N RVT-GII GIIM Feature: gene Location: 19-1491 bp Ori: OLQ83935.1 Feature: domain Description: RVT_N Location: 67-310 bp Feature: domain Description: RVT_N Location: 67-31 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355-982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355-982 bp Feature: domain Description: GIIM Note: maturase Location: 1042-1267 bp Feature: domain Description: GIIM Note: maturase Location: 1 042-1 267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MJIL01000011.1 Photobacterium proteolyticum strain 13-12 C1735, whole genome shotgun sequence (1269 bp)
Overview 1 RT 1: 546-1266 bp Neighborhood of RT #1 [546, 1269] RVT-GII Feature: gene Location: 546-1269 bp Ori: OLQ83947.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762 -12 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MJIL01000072.1 Photobacterium proteolyticum strain 13-12 scaffold36, whole genome shotgun sequence (5243 bp)
Overview 1 RT 1: 1-5243 bp Neighborhood of RT #1 [1, 5243] RVT-UG4 Feature: gene Location: 1-1114 bp Feature: gene Location: 1363-1728 bp Ori: OLQ75712.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1366-1522 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 13 66-1522 bp Feature: gene Location: 1827-2054 bp Feature: gene Location: 2597-5243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: MJIL01000075.1 Photobacterium proteolyticum strain 13-12 scaffold39, whole genome shotgun sequence (226394 bp)
Overview 1 RT 1: 198460-203134 bp Neighborhood of RT #1 [198460, 203226] nicotinamidase_related Tra5 RVT-GII GIIM HTH_32 HTH_Tnp_1 HTH_Tnp_1 Feature: gene Location: 198460-198981 bp Ori: OLQ75549.1 Feature: domain Description: nicotinamidase_related Location: 198484-198946 bp Feature: domain Description: nicotinamidase_related Location: 1984 84 -19894 6 bp Feature: gene Location: 199397-199972 bp Ori: OLQ75550.1 Feature: domain Description: Tra5 Location: 199403-199808 bp Feature: domain Description: Tra5 Location: 1994 03-199808 bp Feature: gene Location: 200101-201624 bp Ori: OLQ75551.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200374-201106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200374 -201106 bp Feature: domain Description: GIIM Note: maturase Location: 201178-201379 bp Feature: domain Description: GIIM Note: maturase Location: 201178-201379 bp Feature: gene Location: 202244-202642 bp Ori: OLQ75587.1 Feature: domain Description: HTH_32 Location: 202265-202484 bp Feature: domain Description: HTH_32 Location: 202265-2024 84 bp Feature: gene Location: 202729-203226 bp Ori: OLQ75552.1 Feature: domain Description: HTH_Tnp_1 Location: 202735-202888 bp Feature: domain Description: HTH_Tnp_1 Location: 202735-202888 bp Feature: domain Description: HTH_Tnp_1 Location: 202906-203134 bp Feature: domain Description: HTH_Tnp_1 Location: 202906-203134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nicotinamidase_related (cd01014), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), HTH_Tnp_1 (pfam01527)