myRT

myRT report for GCA_001939845.1_ASM193984v1

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Seq: MNAK01000032.1 Klebsiella pneumoniae strain XL-1 LSXL1_032, whole genome shotgun sequence (20592 bp)
Overview 1 RT 1: 3595-7522 bp Neighborhood of RT #1 [3595, 7524] InsE RVT-GII GIIM DDE_Tnp_IS1 Feature: gene Location: 3595-3867 bp Ori: OLQ98053.1 Feature: domain Description: InsE Location: 3604-3853 bp Feature: domain Description: InsE Location: 3604-3853 bp Feature: gene Location: 4016-4309 bp Feature: gene Location: 4955-6463 bp Ori: OLQ98074.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5213-5945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 521 3-5945 bp Feature: domain Description: GIIM Note: maturase Location: 6020-6218 bp Feature: domain Description: GIIM Note: maturase Location: 6020-621 8 bp Feature: gene Location: 7005-7136 bp Feature: gene Location: 7147-7524 bp Ori: OLQ98056.1 Feature: domain Description: DDE_Tnp_IS1 Location: 7150-7522 bp Feature: domain Description: DDE_Tnp_IS1 Location: 71 50-7522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS1 (pfam03400)

Seq: MNAK01000028.1 Klebsiella pneumoniae strain XL-1 LSXL1_028, whole genome shotgun sequence (28641 bp)
Overview 1 RT 1: 25614-27887 bp Neighborhood of RT #1 [25614, 28072] PRK10724 SmpB RVT-UG11 Feature: gene Location: 25614-26051 bp Ori: OLQ98815.1 Feature: domain Description: PRK10724 Location: 25617-26046 bp Feature: domain Description: PRK1072 4 Location: 2 5617-2 6046 bp Feature: gene Location: 26201-26683 bp Ori: OLQ98816.1 Feature: domain Description: SmpB Location: 26231-26675 bp Feature: domain Description: SmpB Location: 2 62 31-2 6675 bp Feature: gene Location: 27299-28072 bp Ori: OLQ98817.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27434-27887 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 7434-2 7887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11

Seq: MNAK01000003.1 Klebsiella pneumoniae strain XL-1 LSXL1_003, whole genome shotgun sequence (330475 bp)
Overview 1 RT 1: 327090-330339 bp Neighborhood of RT #1 [327090, 330475] YbjK int RVT-GII Feature: gene Location: 327090-327653 bp Ori: OLR11130.1 Feature: domain Description: YbjK Location: 327096-327633 bp Feature: domain Description: YbjK Location: 3 27096-3 2763 3 bp Feature: gene Location: 327776-328828 bp Ori: OLR11131.1 Feature: domain Description: int Location: 327779-328778 bp Feature: domain Description: int Location: 3 27779-3 28778 bp Feature: gene Location: 329247-330475 bp Ori: OLR11132.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329649-330339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 29649-3 3 03 3 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII