myRT

myRT report for GCA_001940335.1_ASM194033v1

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Seq: MLGD01000016.1 Pseudomonas marincola strain BMP1 Contig_16, whole genome shotgun sequence (69539 bp)
Overview 1 RT 1: 49701-55726 bp Neighborhood of RT #1 [49701, 55803] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like Feature: gene Location: 49701-50633 bp Feature: domain Description: INT_RitB_C_like Location: 50013-50601 bp Feature: domain Description: INT_RitB_C_like Location: 5001 3-50601 bp Feature: gene Location: 50630-51877 bp Feature: domain Description: Phage_int_SAM_1 Location: 50999-51245 bp Feature: domain Description: Phage_int_SAM_1 Location: 50999-51 245 bp Feature: domain Description: INT_RitA_C_like Location: 51326-51854 bp Feature: domain Description: INT_RitA_C_like Location: 51 326-51 854 bp Feature: gene Location: 51929-53773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52613-53303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5261 3-53303 bp Feature: gene Location: 53962-54570 bp Feature: domain Description: GIIM Note: maturase Location: 54052-54163 bp Feature: domain Description: GIIM Note: maturase Location: 54052-541 63 bp Feature: gene Location: 54793-55803 bp Feature: domain Description: Phage_int_SAM_1 Location: 54850-55093 bp Feature: domain Description: Phage_int_SAM_1 Location: 54850-55093 bp Feature: domain Description: INT_RitC_C_like Location: 55189-55726 bp Feature: domain Description: INT_RitC_C_like Location: 551 89-55726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII, GIIM (pfam08388), INT_RitC_C_like (cd01182)

Seq: MLGD01000037.1 Pseudomonas marincola strain BMP1 Contig_37, whole genome shotgun sequence (253846 bp)
Overview 1 RT 1: 192742-197894 bp Neighborhood of RT #1 [192742, 197894] RVT-GII group_II_RT_mat HNHc Feature: gene Location: 192742-193557 bp Feature: gene Location: 193997-194224 bp Feature: gene Location: 194910-196742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195177-195975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195177-195975 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 196182-196317 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 196182 -196317 bp Feature: domain Description: HNHc Note: nucleases Location: 196530-196671 bp Feature: domain Description: HNHc Note: nucleases Location: 196530-196671 bp Feature: gene Location: 197286-197552 bp Feature: gene Location: 197568-197894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507)