myRT

myRT report for GCA_001940785.1_ASM194078v1

Download annotations/find similar RTs

Seq: MSLS01000062.1 Bacillus sp. MRMR6 scaffold_61, whole genome shotgun sequence (7887 bp)
Overview 1 RT 1: 965-4597 bp Neighborhood of RT #1 [965, 4668] DUF4279 RVT-GII GIIM Acetyltransf_1 Feature: gene Location: 965-1399 bp Feature: domain Description: DUF4279 Location: 986-1358 bp Feature: domain Description: DUF4279 Location: 986-1 358 bp Feature: gene Location: 1593-1790 bp Feature: gene Location: 2006-3334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2261-2954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2261 -2954 bp Feature: domain Description: GIIM Note: maturase Location: 3044-3242 bp Feature: domain Description: GIIM Note: maturase Location: 3044-3242 bp Feature: gene Location: 3568-3996 bp Feature: gene Location: 4195-4668 bp Feature: domain Description: Acetyltransf_1 Location: 4291-4597 bp Feature: domain Description: Acetyltransf_1 Location: 4291 -4597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Acetyltransf_1 (pfam00583), DUF4279 (pfam14106)

Seq: MSLS01000021.1 Bacillus sp. MRMR6 scaffold_20, whole genome shotgun sequence (87621 bp)
Overview 1 RT 1: 57311-63879 bp Neighborhood of RT #1 [57311, 63884] addA_Gpos RVT-GII Intron_maturas2 HNHc addA_Gpos gerPA Feature: gene Location: 57311-58666 bp Feature: domain Description: addA_Gpos Location: 57353-58664 bp Feature: domain Description: addA_Gpos Location: 57353-58664 bp Feature: gene Location: 59044-59238 bp Feature: gene Location: 59259-61067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59523-60354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5952 3-60354 bp Feature: domain Description: Intron_maturas2 Location: 60531-60816 bp Feature: domain Description: Intron_maturas2 Location: 60531-60816 bp Feature: domain Description: HNHc Note: nucleases Location: 60891-61053 bp Feature: domain Description: HNHc Note: nucleases Location: 60891-61053 bp Feature: gene Location: 61274-63619 bp Feature: domain Description: addA_Gpos Location: 61277-63608 bp Feature: domain Description: addA_Gpos Location: 612 77-63608 bp Feature: gene Location: 63666-63884 bp Feature: domain Description: gerPA Location: 63669-63879 bp Feature: domain Description: gerPA Location: 63669-63879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT addA_Gpos (TIGR02785), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), gerPA (pfam10676)

Seq: MSLS01000001.1 Bacillus sp. MRMR6 scaffold_0, whole genome shotgun sequence (469079 bp)
Overview 1 RT 1: 359416-365338 bp Neighborhood of RT #1 [359416, 365379] PRK00549 recA RVT-GII HNHc recA recA Feature: gene Location: 359416-360663 bp Feature: domain Description: PRK00549 Location: 359419-360646 bp Feature: domain Description: PRK00549 Location: 3 59419-3 60646 bp Feature: gene Location: 361201-361476 bp Feature: domain Description: recA Location: 361207-361459 bp Feature: domain Description: recA Location: 3 61207-3 61459 bp Feature: gene Location: 362289-364199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362592-363303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 62592-3 63 3 03 bp Feature: domain Description: HNHc Note: nucleases Location: 363948-364113 bp Feature: domain Description: HNHc Note: nucleases Location: 3 63 948-3 64113 bp Feature: gene Location: 364303-364644 bp Feature: domain Description: recA Location: 364306-364630 bp Feature: domain Description: recA Location: 3 643 06-3 6463 0 bp Feature: gene Location: 364852-365379 bp Feature: domain Description: recA Location: 364939-365338 bp Feature: domain Description: recA Location: 3 6493 9-3 653 3 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00549 (competence damage-inducible protein A; Provisional), recA (PRK09519), RVT-GII, HNHc (smart00507)