myRT

myRT report for GCA_001940825.1_ASM194082v1

Download annotations/find similar RTs

Seq: MSGT01000039.1 Sphaerochaeta sp. Phil3 707_L1_merged_contig_367, whole genome shotgun sequence (7778 bp)
Overview 1 RT 1: 24-4649 bp Neighborhood of RT #1 [24, 4649] TIR_2 FRG RVT-Retrons Feature: gene Location: 24-1439 bp Feature: domain Description: TIR_2 Location: 276-552 bp Feature: domain Description: TIR_2 Location: 276-552 bp Feature: gene Location: 1614-3176 bp Feature: domain Description: FRG Location: 2220-2499 bp Feature: domain Description: FRG Location: 2220-2499 bp Feature: gene Location: 3239-4111 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3353-3938 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3353-3938 bp Feature: gene Location: 4151-4321 bp Feature: gene Location: 4494-4649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FRG (smart00901), TIR_2 (pfam13676), RVT-Retrons

Seq: MSGT01000061.1 Sphaerochaeta sp. Phil3 707_L1_merged_contig_71, whole genome shotgun sequence (186740 bp)
Overview 1 RT 1: 87272-90895 bp Neighborhood of RT #1 [87272, 90895] Avd_like RVT-DGRs RVT-DGRs Feature: gene Location: 87272-87508 bp Feature: gene Location: 87883-88293 bp Feature: domain Description: Avd_like Location: 87961-88270 bp Feature: domain Description: Avd_like Location: 87961-882 70 bp Feature: gene Location: 88542-89750 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 88743-88869 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 88743-88869 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89052-89532 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89052 -89532 bp Feature: gene Location: 89755-89886 bp Feature: gene Location: 89993-90895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs