myRT

myRT report for GCA_001942095.1_ASM194209v1

Download annotations/find similar RTs

Seq: MKGV01000118.1 Escherichia coli strain 73G4 73g4_contig_33_(1..7304)_consensus, whole genome shotgun sequence (7304 bp)
Overview 1 RT 1: 4932-6872 bp Neighborhood of RT #1 [4932, 7117] RVT-GII GIIM Feature: gene Location: 4932-5300 bp Feature: gene Location: 5215-5640 bp Feature: gene Location: 5609-7117 bp Ori: OLS74077.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5867-6599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5867-6599 bp Feature: domain Description: GIIM Note: maturase Location: 6674-6872 bp Feature: domain Description: GIIM Note: maturase Location: 6674-6872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MKGV01000126.1 Escherichia coli strain 73G4 73g4_contig_40_(1..42795)_consensus, whole genome shotgun sequence (42795 bp)
Overview 1 RT 1: 591-5404 bp 2 RT 2: 41499-42512 bp Neighborhood of RT #1 [591, 6120] RVT-UG1 GerD HEPN_Apea Neighborhood of RT #2 [41499, 42565] IS285 group_II_RT_mat RVT-GII Feature: gene Location: 591-4280 bp Ori: OLS72785.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1203-1713 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 12 03-1713 bp Feature: gene Location: 4289-4723 bp Ori: OLS72786.1 Feature: domain Description: GerD Location: 4367-4481 bp Feature: domain Description: GerD Location: 4367-4481 bp Feature: gene Location: 5020-6120 bp Ori: OLS72787.1 Feature: domain Description: HEPN_Apea Location: 5089-5404 bp Feature: domain Description: HEPN_Apea Location: 5089-5404 bp Feature: gene Location: 41499-41981 bp Ori: OLS72819.1 Feature: domain Description: IS285 Location: 41529-41907 bp Feature: domain Description: IS2 85 Location: 4152 9-41907 bp Feature: gene Location: 42120-42360 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 42132-42345 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 42 132 -42 345 bp Feature: gene Location: 42329-42565 bp Ori: OLS72820.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42332-42512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 332 -42 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, GerD (pfam17898), HEPN_Apea (pfam18739), IS285 (COG3328), group_II_RT_mat (TIGR04416), RVT-GII