myRT

myRT report for GCA_001942165.1_ASM194216v1

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Seq: MKGY01000005.1 Escherichia coli strain 62D3 62d3_contig_104_(1..7449)_consensus, whole genome shotgun sequence (7449 bp)
Overview 1 RT 1: 5357-7445 bp Neighborhood of RT #1 [5357, 7449] IS285 group_II_RT_mat RVT-GII InsE PHA02517 Feature: gene Location: 5357-5839 bp Ori: OLS95672.1 Feature: domain Description: IS285 Location: 5387-5765 bp Feature: domain Description: IS285 Location: 5387-5765 bp Feature: gene Location: 5978-6218 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5990-6203 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5990-6203 bp Feature: gene Location: 6187-6423 bp Ori: OLS95673.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6190-6370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 90-6370 bp Feature: gene Location: 6699-7001 bp Ori: OLS95674.1 Feature: domain Description: InsE Location: 6702-6987 bp Feature: domain Description: InsE Location: 6702-6987 bp Feature: gene Location: 7037-7449 bp Feature: domain Description: PHA02517 Location: 7052-7445 bp Feature: domain Description: PHA0251 7 Location: 7052-7445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), group_II_RT_mat (TIGR04416), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: MKGY01000078.1 Escherichia coli strain 62D3 62d3_contig_42_(1..11934)_consensus, whole genome shotgun sequence (11934 bp)
Overview 1 RT 1: 562-5375 bp Neighborhood of RT #1 [562, 6091] RVT-UG1 GerD HEPN_Apea Feature: gene Location: 562-4251 bp Ori: OLS90573.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1174-1684 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1174-1684 bp Feature: gene Location: 4260-4694 bp Ori: OLS90574.1 Feature: domain Description: GerD Location: 4338-4452 bp Feature: domain Description: GerD Location: 4338-4452 bp Feature: gene Location: 4991-6091 bp Feature: domain Description: HEPN_Apea Location: 5063-5375 bp Feature: domain Description: HEPN_Apea Location: 5063-5375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, GerD (pfam17898), HEPN_Apea (pfam18739)