myRT

myRT report for GCA_001942255.1_ASM194225v1

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Seq: MKKC01000106.1 Nocardiopsis sp. CNR-923 NODE_57_length_26479_cov_186.954_ID_385, whole genome shotgun sequence (26479 bp)
Overview 1 RT 1: 22780-26248 bp Neighborhood of RT #1 [22780, 26479] DDE_Tnp_ISL3 RVT-GII Intron_maturas2 Feature: gene Location: 22780-23073 bp Feature: gene Location: 23841-24326 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 24084-24309 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 24084-24309 bp Feature: gene Location: 24850-26479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25111-25912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 1 1 -2591 2 bp Feature: domain Description: Intron_maturas2 Location: 26017-26248 bp Feature: domain Description: Intron_maturas2 Location: 2601 7-26248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISL3 (pfam01610), RVT-GII, Intron_maturas2 (pfam01348)

Seq: MKKC01000104.1 Nocardiopsis sp. CNR-923 NODE_55_length_28810_cov_156.375_ID_105, whole genome shotgun sequence (28810 bp)
Overview 1 RT 1: 19471-25056 bp Neighborhood of RT #1 [19471, 26587] PRK12448 CxxC_CXXC_SSSS RVT-GII GIIM McrA Peptidase_S9_N Feature: gene Location: 19471-21269 bp Feature: domain Description: PRK12448 Location: 19474-19756 bp Feature: domain Description: PRK12 448 Location: 19474-19756 bp Feature: gene Location: 21323-21529 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 21326-21449 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 132 6-2 1449 bp Feature: gene Location: 21637-23007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21976-22612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1976-2 2 612 bp Feature: domain Description: GIIM Note: maturase Location: 22702-22912 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 702 -2 2 912 bp Feature: gene Location: 23616-24116 bp Feature: domain Description: McrA Location: 23643-24039 bp Feature: domain Description: McrA Location: 2 3643-2 4039 bp Feature: gene Location: 24495-26587 bp Feature: domain Description: Peptidase_S9_N Location: 24534-25056 bp Feature: domain Description: Peptidase_S9_N Location: 2 4534-2 5056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12448 (dihydroxy-acid dehydratase; Provisional), CxxC_CXXC_SSSS (smart00834), RVT-GII, GIIM (pfam08388), McrA (COG4058), Peptidase_S9_N (pfam02897)

Seq: MKKC01000030.1 Nocardiopsis sp. CNR-923 NODE_127_length_2177_cov_614.983_ID_257, whole genome shotgun sequence (2177 bp)
Overview 1 RT 1: 116-1343 bp Neighborhood of RT #1 [116, 1510] RVT-GII GIIM Feature: gene Location: 116-1510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 77-1061 bp Feature: domain Description: GIIM Note: maturase Location: 1130-1343 bp Feature: domain Description: GIIM Note: maturase Location: 113 0-13 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)