myRT

myRT report for GCA_001942305.1_ASM194230v1

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Seq: MKKE01000044.1 Saccharomonospora sp. CUA-673 NODE_4_length_233155_cov_279.992_ID_307, whole genome shotgun sequence (233155 bp)
Overview 1 RT 1: 115180-119828 bp Neighborhood of RT #1 [115180, 120061] HTH_XRE QueC RVT-CRISPR-like YfmG PRK02101 Feature: gene Location: 115180-116354 bp Feature: domain Description: HTH_XRE Location: 115201-115372 bp Feature: domain Description: HTH_XRE Location: 1 1 5201 -1 1 5372 bp Feature: gene Location: 117309-118076 bp Ori: OLT41693.1 Feature: domain Description: QueC Location: 117402-118062 bp Feature: domain Description: QueC Location: 1 1 7402-1 1 8062 bp Feature: gene Location: 118277-119056 bp Ori: OLT41694.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 118490-119018 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 1 8490-1 1 901 8 bp Feature: gene Location: 119061-119609 bp Ori: OLT41695.1 Feature: domain Description: YfmG Location: 119193-119604 bp Feature: domain Description: YfmG Location: 1 1 91 93-1 1 9604 bp Feature: gene Location: 119606-120061 bp Ori: OLT41696.1 Feature: domain Description: PRK02101 Location: 119672-119828 bp Feature: domain Description: PRK021 01 Location: 1 1 9672-1 1 9828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), QueC (pfam06508), RVT-CRISPR, YfmG (COG1262), PRK02101 (peroxide stress protein YaaA)

Seq: MKKE01000067.1 Saccharomonospora sp. CUA-673 NODE_70_length_8827_cov_342.031_ID_149, whole genome shotgun sequence (8827 bp)
Overview 1 RT 1: 3604-6831 bp Neighborhood of RT #1 [3604, 6831] pfam03781 RVT-GII QueC Feature: gene Location: 3604-4092 bp Feature: gene Location: 4089-4646 bp Ori: OLT39771.1 Feature: domain Description: pfam03781 Location: 4233-4638 bp Feature: domain Description: pfam03781 Location: 42 33-4638 bp Feature: gene Location: 4650-5347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4770-4938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4770-4938 bp Feature: gene Location: 5642-6346 bp Ori: OLT39775.1 Feature: domain Description: QueC Location: 5678-6338 bp Feature: domain Description: QueC Location: 5678-6338 bp Feature: gene Location: 6349-6831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-GII, QueC (pfam06508)