myRT

myRT report for GCA_001945445.1_ASM194544v1

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Seq: MSXW01000052.1 Pseudomonas sp. PA27(2017) strain PA27 NODE_221_length_110315_cov_101.933517, whole genome shotgun sequence (110463 bp)
Overview 1 RT 1: 32500-40280 bp Neighborhood of RT #1 [32500, 40280] PLDc_CLS_2 SLATT_5 RVT-UG17 UvrD UvrD UvrD Feature: gene Location: 32500-33807 bp Ori: OLU26458.1 Feature: domain Description: PLDc_CLS_2 Location: 32518-32932 bp Feature: domain Description: PLDc_CLS_2 Location: 3251 8-32932 bp Feature: gene Location: 34313-34879 bp Ori: OLU26526.1 Feature: domain Description: SLATT_5 Location: 34322-34847 bp Feature: domain Description: SLATT_5 Location: 34322-34847 bp Feature: gene Location: 34876-36240 bp Ori: OLU26459.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 35104-35707 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 351 04-35707 bp Feature: gene Location: 36318-38495 bp Ori: OLU26460.1 Feature: domain Description: UvrD Location: 36375-36660 bp Feature: domain Description: UvrD Location: 36375-36660 bp Feature: domain Description: UvrD Location: 37584-37935 bp Feature: domain Description: UvrD Location: 37584-37935 bp Feature: domain Description: UvrD Location: 38094-38409 bp Feature: domain Description: UvrD Location: 38094-38409 bp Feature: gene Location: 39470-40280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_CLS_2 (cd09112), SLATT_5 (pfam18160), RVT-UG17, UvrD (COG0210)

Seq: MSXW01000061.1 Pseudomonas sp. PA27(2017) strain PA27 NODE_254_length_651970_cov_87.797165, whole genome shotgun sequence (652118 bp)
Overview 1 RT 1: 167919-171813 bp Neighborhood of RT #1 [167919, 171813] GATase1_Hsp31_like RVT-Retrons Feature: gene Location: 167919-168596 bp Ori: OLU23922.1 Feature: domain Description: GATase1_Hsp31_like Location: 167928-168591 bp Feature: domain Description: GATase1_Hsp31_like Location: 16792 8-168591 bp Feature: gene Location: 169496-170062 bp Feature: gene Location: 170062-171012 bp Ori: OLU23924.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 170173-170746 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 170173-170746 bp Feature: gene Location: 171074-171487 bp Feature: gene Location: 171543-171813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GATase1_Hsp31_like (cd03141), RVT-Retrons