myRT

myRT report for GCA_001950675.1_ASM195067v1

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Seq: BDLH01000009.1 Klebsiella pneumoniae DNA, contig: contig_9, strain: MRY10-897, whole genome shotgun sequence (12572 bp)
Overview 1 RT 1: 4796-9818 bp Neighborhood of RT #1 [4796, 9826] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 4796-5761 bp Feature: domain Description: ArdC Location: 4922-5756 bp Feature: domain Description: ArdC Location: 4922-5756 bp Feature: gene Location: 5893-6162 bp Feature: gene Location: 6231-7718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6636-7326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6636-7326 bp Feature: gene Location: 7872-8555 bp Feature: domain Description: PRK10276 Location: 8175-8538 bp Feature: domain Description: PRK1 0276 Location: 81 75-8538 bp Feature: gene Location: 8555-9826 bp Feature: domain Description: umuC Location: 8558-9818 bp Feature: domain Description: umuC Location: 8558-981 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: BDLH01000041.1 Klebsiella pneumoniae DNA, contig: contig_41, strain: MRY10-897, whole genome shotgun sequence (148627 bp)
Overview 1 RT 1: 109839-116707 bp Neighborhood of RT #1 [109839, 116709] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 109839-110567 bp Feature: domain Description: FimC Location: 109887-110550 bp Feature: domain Description: FimC Location: 109887-110550 bp Feature: gene Location: 110599-113208 bp Feature: domain Description: FimD Location: 110656-113197 bp Feature: domain Description: FimD Location: 110656-113197 bp Feature: gene Location: 113208-115286 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 113616-114060 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 113616-114060 bp Feature: gene Location: 115343-115783 bp Feature: domain Description: Integrase_1 Location: 115349-115565 bp Feature: domain Description: Integrase_1 Location: 115349-115565 bp Feature: gene Location: 116044-116709 bp Feature: domain Description: INT_P4_C Location: 116149-116707 bp Feature: domain Description: INT_P4_C Location: 116149-116707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: BDLH01000045.1 Klebsiella pneumoniae DNA, contig: contig_45, strain: MRY10-897, whole genome shotgun sequence (13965 bp)
Overview 1 RT 1: 6009-9217 bp Neighborhood of RT #1 [6009, 9217] PRK10276 RVT-GII Feature: gene Location: 6009-6434 bp Feature: domain Description: PRK10276 Location: 6012-6420 bp Feature: domain Description: PRK10276 Location: 6012-6420 bp Feature: gene Location: 6552-6785 bp Feature: gene Location: 6836-8371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7241-7979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7241-7979 bp Feature: gene Location: 8605-8835 bp Feature: gene Location: 8894-9217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: BDLH01000088.1 Klebsiella pneumoniae DNA, contig: contig_88, strain: MRY10-897, whole genome shotgun sequence (3190 bp)
Overview 1 RT 1: 1-2672 bp Neighborhood of RT #1 [1, 2672] RVT-GII GIIM Feature: gene Location: 1-138 bp Feature: gene Location: 225-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 98-1230 bp Feature: domain Description: GIIM Note: maturase Location: 1305-1503 bp Feature: domain Description: GIIM Note: maturase Location: 1305-1503 bp Feature: gene Location: 2042-2479 bp Feature: gene Location: 2484-2672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)