myRT

myRT report for GCA_001953575.1_ASM195357v1

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Seq: MRZT01000001.1 Francisella tularensis subsp. holarctica strain 08T0073 08T00737_contig_001, whole genome shotgun sequence (45221 bp)
Overview 1 RT 1: 13545-17144 bp Neighborhood of RT #1 [13545, 17167] RVT-UG4 DsbB SufE Feature: gene Location: 13545-13742 bp Feature: gene Location: 13793-14206 bp Feature: gene Location: 14969-15196 bp Ori: OLY99020.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15035-15140 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 5035-1 51 40 bp Feature: gene Location: 15508-16053 bp Ori: OLY99021.1 Feature: domain Description: DsbB Location: 15523-16000 bp Feature: domain Description: DsbB Location: 1 5523-1 6000 bp Feature: gene Location: 16751-17167 bp Ori: OLY99022.1 Feature: domain Description: SufE Location: 16790-17144 bp Feature: domain Description: SufE Location: 1 6790-1 71 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657)

Seq: MRZT01000095.1 Francisella tularensis subsp. holarctica strain 08T0073 08T00737_contig_095, whole genome shotgun sequence (6906 bp)
Overview 1 RT 1: 2228-6899 bp Neighborhood of RT #1 [2228, 6899] RVT-UG4 DUF2797 Feature: gene Location: 2228-2453 bp Feature: gene Location: 2790-5061 bp Feature: gene Location: 5067-5499 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5073-5253 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5073-52 53 bp Feature: gene Location: 5740-6555 bp Ori: OLY95422.1 Feature: domain Description: DUF2797 Location: 5842-6538 bp Feature: domain Description: DUF2 797 Location: 5842 -6538 bp Feature: gene Location: 6654-6899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977)

Seq: MRZT01000052.1 Francisella tularensis subsp. holarctica strain 08T0073 08T00737_contig_052, whole genome shotgun sequence (35820 bp)
Overview 1 RT 1: 9-4246 bp Neighborhood of RT #1 [9, 4251] RVT-Retrons KOG0539 rlmL Feature: gene Location: 9-503 bp Ori: OLY97668.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27-339 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27-3 3 9 bp Feature: gene Location: 1469-2023 bp Ori: OLY97641.1 Feature: domain Description: KOG0539 Location: 1541-2018 bp Feature: domain Description: KOG053 9 Location: 1541-2018 bp Feature: gene Location: 2098-4251 bp Ori: OLY97642.1 Feature: domain Description: rlmL Location: 2110-4246 bp Feature: domain Description: rlmL Location: 2110-4246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), rlmL (PRK11783)