myRT

myRT report for GCA_001953785.1_ASM195378v1

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Seq: MPSN01000002.1 Lactobacillus murinus strain EF-1 WT_MP_R1_trim_repaired_(paired)_contig_2, whole genome shotgun sequence (309081 bp)
Overview 1 RT 1: 242518-250413 bp Neighborhood of RT #1 [242518, 250448] DUF871 RVT-Retrons PLDc_N_DEXD_b2 SSL2 DUF3427 MutT_pyrophosphohydrolase Feature: gene Location: 242518-243615 bp Feature: domain Description: DUF871 Location: 242545-243574 bp Feature: domain Description: DUF871 Location: 242545-243574 bp Feature: gene Location: 243811-244548 bp Feature: gene Location: 244977-246725 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 245103-245703 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2451 03-245703 bp Feature: gene Location: 247109-250036 bp Feature: domain Description: PLDc_N_DEXD_b2 Location: 247235-247670 bp Feature: domain Description: PLDc_N_DEXD_b2 Location: 247235-247670 bp Feature: domain Description: SSL2 Location: 247751-248909 bp Feature: domain Description: SSL2 Location: 247751 -248909 bp Feature: domain Description: DUF3427 Location: 249188-250028 bp Feature: domain Description: DUF3427 Location: 2491 88-250028 bp Feature: gene Location: 250029-250448 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 250047-250413 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 250047-25041 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF871 (pfam05913), RVT-Retrons, PLDc_N_DEXD_b2 (cd09204), SSL2 (COG1061), DUF3427 (pfam11907), MutT_pyrophosphohydrolase (cd03425)