myRT

myRT report for GCA_001954415.1_ASM195441v1

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Seq: MPTB01000107.1 Paenibacillus borealis strain FSL H7-0744 NODE_107_length_4037_cov_0.98451_ID_10943, whole genome shotgun sequence (4037 bp)
Overview 1 RT 1: 396-3642 bp Neighborhood of RT #1 [396, 3642] DDE_5 RVT-GII GIIM Feature: gene Location: 396-920 bp Feature: domain Description: DDE_5 Location: 615-900 bp Feature: domain Description: DDE_5 Location: 61 5-900 bp Feature: gene Location: 1161-2459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1416-2106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 6-21 06 bp Feature: domain Description: GIIM Note: maturase Location: 2166-2379 bp Feature: domain Description: GIIM Note: maturase Location: 21 66-2379 bp Feature: gene Location: 3067-3642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_5 (pfam13546)

Seq: MPTB01000001.1 Paenibacillus borealis strain FSL H7-0744 NODE_1_length_304964_cov_0.944789_ID_10721, whole genome shotgun sequence (304964 bp)
Overview 1 RT 1: 195600-202229 bp Neighborhood of RT #1 [195600, 202237] PRK03660 PRK05572 RVT-GII GIIM RVT-GII OmpR Feature: gene Location: 195600-196055 bp Feature: domain Description: PRK03660 Location: 195624-196047 bp Feature: domain Description: PRK03660 Location: 19562 4-196047 bp Feature: gene Location: 196067-196822 bp Feature: domain Description: PRK05572 Location: 196085-196817 bp Feature: domain Description: PRK05572 Location: 196085-196817 bp Feature: gene Location: 197454-198746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197754-198387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197754-198387 bp Feature: domain Description: GIIM Note: maturase Location: 198510-198696 bp Feature: domain Description: GIIM Note: maturase Location: 198510-198696 bp Feature: gene Location: 199351-200673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199606-200299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199606-2 002 99 bp Feature: gene Location: 200734-201051 bp Feature: gene Location: 201551-202237 bp Feature: domain Description: OmpR Location: 201563-202229 bp Feature: domain Description: OmpR Location: 2 01563-2 02 2 2 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03660 (anti-sigma F factor; Provisional), PRK05572 (RNA polymerase sporulation sigma factor, SigF/SigG family), RVT-GII, GIIM (pfam08388), OmpR (COG0745)

Seq: MPTB01000112.1 Paenibacillus borealis strain FSL H7-0744 NODE_112_length_2667_cov_1.92095_ID_10951, whole genome shotgun sequence (2667 bp)
Overview 1 RT 1: 743-2393 bp Neighborhood of RT #1 [743, 2542] RVT-GII HNHc Feature: gene Location: 743-2542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1001-1700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1001-1700 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-23 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)