myRT

myRT report for GCA_001954655.1_ASM195465v1

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Seq: MPTP01000010.1 Paenibacillus odorifer strain FSL H7-0718 NODE_10_length_200293_cov_1.32304_ID_7056, whole genome shotgun sequence (200293 bp)
Overview 1 RT 1: 17485-25262 bp Neighborhood of RT #1 [17485, 25267] DUF1854 MdlB RVT-GII GIIM AmyAc_SI_OligoGlu_DGase Malt_amylase_C PurR Feature: gene Location: 17485-18018 bp Ori: OME24813.1 Feature: domain Description: DUF1854 Location: 17623-18010 bp Feature: domain Description: DUF1 854 Location: 1 7623-1 801 0 bp Feature: gene Location: 18011-20206 bp Ori: OME24814.1 Feature: domain Description: MdlB Location: 18461-20168 bp Feature: domain Description: MdlB Location: 1 8461 -201 68 bp Feature: gene Location: 20373-21635 bp Ori: OME24815.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20568-21189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20568-21 1 89 bp Feature: domain Description: GIIM Note: maturase Location: 21240-21447 bp Feature: domain Description: GIIM Note: maturase Location: 21 240-21 447 bp Feature: gene Location: 22336-23997 bp Feature: domain Description: AmyAc_SI_OligoGlu_DGase Location: 22357-23740 bp Feature: domain Description: AmyAc_SI_OligoGlu_DGase Location: 22357-23740 bp Feature: domain Description: Malt_amylase_C Location: 23764-23983 bp Feature: domain Description: Malt_amylase_C Location: 23764-23983 bp Feature: gene Location: 24302-25267 bp Ori: OME24950.1 Feature: domain Description: PurR Location: 24305-25262 bp Feature: domain Description: PurR Location: 24305-25262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1854 (pfam08909), MdlB (COG1132), RVT-GII, GIIM (pfam08388), AmyAc_SI_OligoGlu_DGase (cd11333), Malt_amylase_C (pfam16657), PurR (COG1609)

Seq: MPTP01000048.1 Paenibacillus odorifer strain FSL H7-0718 NODE_48_length_32721_cov_2.08706_ID_7138, whole genome shotgun sequence (32721 bp)
Overview 1 RT 1: 21913-32583 bp Neighborhood of RT #1 [21913, 32705] XRE DUF2199 RVT-GII PRK12467 alpha_am_amid alpha_am_amid PRK09294 EntF PRK12467 PRK12316 Feature: gene Location: 21913-22131 bp Ori: OME15103.1 Feature: domain Description: XRE Location: 21919-22108 bp Feature: domain Description: XRE Location: 2 1919-2 2 108 bp Feature: gene Location: 22706-23194 bp Ori: OME15104.1 Feature: domain Description: DUF2199 Location: 22712-23144 bp Feature: domain Description: DUF2 199 Location: 2 2 712 -2 3144 bp Feature: gene Location: 23561-23758 bp Ori: OME15105.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23567-23741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3567-2 3741 bp Feature: gene Location: 25174-32247 bp Ori: OME15106.1 Feature: domain Description: PRK12467 Location: 25180-26683 bp Feature: domain Description: PRK12 467 Location: 2 5180-2 6683 bp Feature: domain Description: alpha_am_amid Location: 26998-27901 bp Feature: domain Description: alpha_am_amid Location: 2 6998-2 7901 bp Feature: domain Description: alpha_am_amid Location: 27904-28294 bp Feature: domain Description: alpha_am_amid Location: 2 7904-2 82 94 bp Feature: domain Description: PRK09294 Location: 28423-28834 bp Feature: domain Description: PRK092 94 Location: 2 842 3-2 8834 bp Feature: domain Description: EntF Location: 29029-30973 bp Feature: domain Description: EntF Location: 2 902 9-30973 bp Feature: domain Description: PRK12467 Location: 31075-31936 bp Feature: domain Description: PRK12 467 Location: 31075-31936 bp Feature: gene Location: 32244-32705 bp Ori: OME15107.1 Feature: domain Description: PRK12316 Location: 32247-32583 bp Feature: domain Description: PRK12 316 Location: 32 2 47-32 583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), DUF2199 (pfam09965), RVT-GII, PRK12467 (peptide synthase; Provisional), alpha_am_amid (TIGR03443), PRK09294 (phthiocerol/phthiodiolone dimycocerosyl transferase), EntF (COG3319), PRK12316 (peptide synthase; Provisional)