myRT

myRT report for GCA_001955785.1_ASM195578v1

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Seq: MPTT01000059.1 Paenibacillus odorifer strain FSL R5-0937 NODE_59_length_34178_cov_2.18442_ID_8465, whole genome shotgun sequence (34178 bp)
Overview 1 RT 1: 23377-34046 bp Neighborhood of RT #1 [23377, 34168] XRE DUF2199 RVT-GII PRK12467 alpha_am_amid alpha_am_amid PRK09294 EntF PRK12467 PRK12316 Feature: gene Location: 23377-23595 bp Ori: OME45847.1 Feature: domain Description: XRE Location: 23383-23572 bp Feature: domain Description: XRE Location: 23383-23572 bp Feature: gene Location: 24170-24658 bp Ori: OME45848.1 Feature: domain Description: DUF2199 Location: 24176-24608 bp Feature: domain Description: DUF21 99 Location: 241 76-24608 bp Feature: gene Location: 25025-25222 bp Ori: OME45849.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25031-25205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25031 -25205 bp Feature: gene Location: 26637-33710 bp Ori: OME45850.1 Feature: domain Description: PRK12467 Location: 26643-28146 bp Feature: domain Description: PRK1 2467 Location: 26643-281 46 bp Feature: domain Description: alpha_am_amid Location: 28461-29364 bp Feature: domain Description: alpha_am_amid Location: 28461 -29364 bp Feature: domain Description: alpha_am_amid Location: 29367-29757 bp Feature: domain Description: alpha_am_amid Location: 29367-29757 bp Feature: domain Description: PRK09294 Location: 29886-30297 bp Feature: domain Description: PRK09294 Location: 29886-30297 bp Feature: domain Description: EntF Location: 30492-32436 bp Feature: domain Description: EntF Location: 30492-32436 bp Feature: domain Description: PRK12467 Location: 32505-33399 bp Feature: domain Description: PRK1 2467 Location: 32505-33399 bp Feature: gene Location: 33707-34168 bp Ori: OME45851.1 Feature: domain Description: PRK12316 Location: 33710-34046 bp Feature: domain Description: PRK1 231 6 Location: 3371 0-34046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), DUF2199 (pfam09965), RVT-GII, PRK12467 (peptide synthase; Provisional), alpha_am_amid (TIGR03443), PRK09294 (phthiocerol/phthiodiolone dimycocerosyl transferase), EntF (COG3319), PRK12316 (peptide synthase; Provisional)

Seq: MPTT01000018.1 Paenibacillus odorifer strain FSL R5-0937 NODE_18_length_131716_cov_1.8078_ID_8385, whole genome shotgun sequence (131716 bp)
Overview 1 RT 1: 42339-48427 bp Neighborhood of RT #1 [42339, 48441] SASP NrdR RVT-GII GIIM rSAM_six_Cys HTH_XRE Feature: gene Location: 42339-42557 bp Ori: OME52974.1 Feature: domain Description: SASP Location: 42363-42540 bp Feature: domain Description: SASP Location: 42 363-42 540 bp Feature: gene Location: 42722-43198 bp Ori: OME52975.1 Feature: domain Description: NrdR Location: 42725-43172 bp Feature: domain Description: NrdR Location: 42 72 5-43172 bp Feature: gene Location: 44516-45778 bp Ori: OME52976.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44711-45332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44711-45332 bp Feature: domain Description: GIIM Note: maturase Location: 45383-45590 bp Feature: domain Description: GIIM Note: maturase Location: 45383-45590 bp Feature: gene Location: 46351-47745 bp Ori: OME52977.1 Feature: domain Description: rSAM_six_Cys Location: 46357-47707 bp Feature: domain Description: rSAM_six_Cys Location: 46357-47707 bp Feature: gene Location: 48196-48441 bp Ori: OME52978.1 Feature: domain Description: HTH_XRE Location: 48256-48427 bp Feature: domain Description: HTH_XRE Location: 482 56-4842 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SASP (pfam00269), NrdR (COG1327), RVT-GII, GIIM (pfam08388), rSAM_six_Cys (TIGR03974), HTH_XRE (smart00530)