myRT

myRT report for GCA_001955835.1_ASM195583v1

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Seq: MPTU01000083.1 Paenibacillus odorifer strain FSL F4-0126 NODE_83_length_1360_cov_0.0166534_ID_7699, whole genome shotgun sequence (1360 bp)
Overview 1 RT 1: 1-793 bp Neighborhood of RT #1 [1, 1177] RVT-UNC Feature: gene Location: 1-1177 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 133-793 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 33-793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: MPTU01000079.1 Paenibacillus odorifer strain FSL F4-0126 NODE_79_length_1842_cov_8.32874_ID_7691, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 82-1156 bp Neighborhood of RT #1 [82, 1344] RVT-GII GIIM Feature: gene Location: 82-1344 bp Ori: OME45355.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 77-898 bp Feature: domain Description: GIIM Note: maturase Location: 949-1156 bp Feature: domain Description: GIIM Note: maturase Location: 949-1156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MPTU01000016.1 Paenibacillus odorifer strain FSL F4-0126 NODE_16_length_126181_cov_1.39173_ID_7561, whole genome shotgun sequence (126181 bp)
Overview 1 RT 1: 83370-90147 bp Neighborhood of RT #1 [83370, 90602] TOPRIM_DnaG_primases SLATT_5 RVT-UG17 Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 83370-84629 bp Ori: OME52812.1 Feature: domain Description: TOPRIM_DnaG_primases Location: 84303-84480 bp Feature: domain Description: TOPRIM_DnaG_primases Location: 843 03 -84480 bp Feature: gene Location: 85660-86238 bp Ori: OME52813.1 Feature: domain Description: SLATT_5 Location: 85678-86224 bp Feature: domain Description: SLATT_5 Location: 85678-86224 bp Feature: gene Location: 86243-87586 bp Ori: OME52814.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 86471-87059 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 86471-87059 bp Feature: gene Location: 87743-88840 bp Feature: gene Location: 89025-90602 bp Ori: OME52816.1 Feature: domain Description: Resolvase Location: 89049-89487 bp Feature: domain Description: Resolvase Location: 89049-89487 bp Feature: domain Description: Recombinase Location: 89574-89913 bp Feature: domain Description: Recombinase Location: 89574-89913 bp Feature: domain Description: Zn_ribbon_recom Location: 89961-90147 bp Feature: domain Description: Zn_ribbon_recom Location: 89961-90147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TOPRIM_DnaG_primases (cd03364), SLATT_5 (pfam18160), RVT-UG17, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)