myRT

myRT report for GCA_001955925.1_ASM195592v1

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Seq: MRTX01000041.1 Paenibacillus sp. FSL R7-0337 NODE_41_length_55697_cov_1.90951_ID_5993, whole genome shotgun sequence (55697 bp)
Overview 1 RT 1: 16377-22197 bp Neighborhood of RT #1 [16377, 22197] TraC-F-type DnaA_homol_Hda NlpD RVT-GII HNHc Feature: gene Location: 16377-18230 bp Ori: OMF86053.1 Feature: domain Description: TraC-F-type Location: 16440-17493 bp Feature: domain Description: TraC-F-type Location: 1 6440-1 7493 bp Feature: domain Description: DnaA_homol_Hda Location: 17802-17985 bp Feature: domain Description: DnaA_homol_Hda Location: 1 7802-1 7985 bp Feature: gene Location: 18244-19158 bp Ori: OMF86054.1 Feature: domain Description: NlpD Location: 18469-18868 bp Feature: domain Description: NlpD Location: 1 8469-1 8868 bp Feature: gene Location: 19864-21639 bp Ori: OMF86084.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20122-20821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 22-20821 bp Feature: domain Description: HNHc Note: nucleases Location: 21382-21517 bp Feature: domain Description: HNHc Note: nucleases Location: 21 382-21 51 7 bp Feature: gene Location: 21681-21944 bp Feature: gene Location: 21946-22197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), DnaA_homol_Hda (TIGR03420), NlpD (COG0739), RVT-GII, HNHc (smart00507)

Seq: MRTX01000017.1 Paenibacillus sp. FSL R7-0337 NODE_17_length_173405_cov_1.73351_ID_5951, whole genome shotgun sequence (173405 bp)
Overview 1 RT 1: 10447-15249 bp Neighborhood of RT #1 [10447, 15350] alaDH DDE_5 RVT-GII CcmA ABC2_membrane Feature: gene Location: 10447-11580 bp Ori: OMF91656.1 Feature: domain Description: alaDH Location: 10450-11563 bp Feature: domain Description: alaDH Location: 10450-11563 bp Feature: gene Location: 12299-12889 bp Ori: OMF91657.1 Feature: domain Description: DDE_5 Location: 12302-12449 bp Feature: domain Description: DDE_5 Location: 12 302 -12 449 bp Feature: gene Location: 12890-13297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13190-13268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13190-132 68 bp Feature: gene Location: 13681-14622 bp Ori: OMF91658.1 Feature: domain Description: CcmA Location: 13687-14599 bp Feature: domain Description: CcmA Location: 13687-14599 bp Feature: gene Location: 14619-15350 bp Ori: OMF91659.1 Feature: domain Description: ABC2_membrane Location: 14661-15249 bp Feature: domain Description: ABC2 _membrane Location: 14661-152 49 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT alaDH (TIGR00518), DDE_5 (pfam13546), RVT-GII, CcmA (COG4133), ABC2_membrane (pfam01061)