myRT

myRT report for GCA_001956175.1_ASM195617v1

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Seq: MRTO01000006.1 Paenibacillus amylolyticus strain FSL J3-0122 NODE_6_length_444263_cov_1.65064_ID_3174, whole genome shotgun sequence (444263 bp)
Overview 1 RT 1: 439497-444245 bp Neighborhood of RT #1 [439497, 444245] RVT-UG15 Feature: gene Location: 439497-439682 bp Feature: gene Location: 440051-441610 bp Feature: gene Location: 441785-443287 bp Ori: OMF43341.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 442187-442604 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 4421 87-442604 bp Feature: gene Location: 443505-444245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15

Seq: MRTO01000003.1 Paenibacillus amylolyticus strain FSL J3-0122 NODE_3_length_578102_cov_1.41729_ID_3170, whole genome shotgun sequence (578102 bp)
Overview 1 RT 1: 177816-183278 bp Neighborhood of RT #1 [177816, 183278] HTH_XRE MalY RVT-GII GIIM KOG2994 Feature: gene Location: 177816-178523 bp Ori: OMF45185.1 Feature: domain Description: HTH_XRE Location: 177843-178011 bp Feature: domain Description: HTH_XRE Location: 177843-178011 bp Feature: gene Location: 178775-179995 bp Ori: OMF45186.1 Feature: domain Description: MalY Location: 178784-179963 bp Feature: domain Description: MalY Location: 178784-179963 bp Feature: gene Location: 180581-181873 bp Ori: OMF45187.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180881-181514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180881-181514 bp Feature: domain Description: GIIM Note: maturase Location: 181637-181814 bp Feature: domain Description: GIIM Note: maturase Location: 181637-181814 bp Feature: gene Location: 182171-182839 bp Ori: OMF45188.1 Feature: domain Description: KOG2994 Location: 182177-182825 bp Feature: domain Description: KOG2 994 Location: 182 177-182 82 5 bp Feature: gene Location: 182859-183278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), MalY (COG1168), RVT-GII, GIIM (pfam08388), KOG2994 (KOG2994, Uracil DNA glycosylase )