myRT

myRT report for GCA_001957225.1_ASM195722v1

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Seq: MTKE01000054.1 Escherichia coli strain ICBEC2AM NODE_62_length_1992_cov_9.037651, whole genome shotgun sequence (2070 bp)
Overview 1 RT 1: 76-1903 bp Neighborhood of RT #1 [76, 2070] Psu PRK09678 RVT-UG3 Feature: gene Location: 76-447 bp Ori: OMH05258.1 Feature: domain Description: Psu Location: 79-427 bp Feature: domain Description: Psu Location: 79-427 bp Feature: gene Location: 453-725 bp Ori: OMH05259.1 Feature: domain Description: PRK09678 Location: 462-627 bp Feature: domain Description: PRK09678 Location: 462-627 bp Feature: gene Location: 1120-2070 bp Ori: OMH05260.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1408-1903 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 408-1 903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3

Seq: MTKE01000283.1 Escherichia coli strain ICBEC2AM NODE_378_length_2198_cov_35.002731, whole genome shotgun sequence (2276 bp)
Overview 1 RT 1: 1-1939 bp Neighborhood of RT #1 [1, 2184] RVT-GII GIIM Feature: gene Location: 1-247 bp Feature: gene Location: 282-707 bp Feature: gene Location: 661-2184 bp Ori: OMH00567.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 934-1666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 934-1666 bp Feature: domain Description: GIIM Note: maturase Location: 1741-1939 bp Feature: domain Description: GIIM Note: maturase Location: 1741-1939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MTKE01000312.1 Escherichia coli strain ICBEC2AM NODE_410_length_8755_cov_22.043289, whole genome shotgun sequence (8833 bp)
Overview 1 RT 1: 348-4027 bp Neighborhood of RT #1 [348, 4029] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 348-554 bp Feature: gene Location: 1203-3104 bp Ori: OMH00236.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1470-2301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1470-23 01 bp Feature: domain Description: Intron_maturas2 Location: 2415-2673 bp Feature: domain Description: Intron_maturas2 Location: 2415-2673 bp Feature: domain Description: HNHc Note: nucleases Location: 2847-3009 bp Feature: domain Description: HNHc Note: nucleases Location: 2847-3 009 bp Feature: gene Location: 3254-3739 bp Ori: OMH00237.1 Feature: domain Description: PRK13732 Location: 3257-3737 bp Feature: domain Description: PRK13 73 2 Location: 3 257-3 73 7 bp Feature: gene Location: 3796-4029 bp Ori: OMH00238.1 Feature: domain Description: DUF905 Location: 3826-4027 bp Feature: domain Description: DUF905 Location: 3 826-4027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)