myRT

myRT report for GCA_001969615.1_ASM196961v1

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Seq: LTAA01000123.1 Enterococcus faecium strain VRE2 VRE2_contig123, whole genome shotgun sequence (3261 bp)
Overview 1 RT 1: 2-3228 bp Neighborhood of RT #1 [2, 3230] RVT-AbiP2 HsdM Feature: gene Location: 2-1471 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 344-809 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 344-809 bp Feature: gene Location: 1809-3230 bp Feature: domain Description: HsdM Location: 1830-3228 bp Feature: domain Description: HsdM Location: 1 830-3228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: LTAA01000032.1 Enterococcus faecium strain VRE2 VRE2_contig32, whole genome shotgun sequence (113327 bp)
Overview 1 RT 1: 22624-28182 bp Neighborhood of RT #1 [22624, 28190] Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 22624-23766 bp Feature: domain Description: Dcm Location: 22627-23740 bp Feature: domain Description: Dcm Location: 2 2 62 7-2 3740 bp Feature: gene Location: 23811-24191 bp Feature: domain Description: FtsK Location: 23826-24066 bp Feature: domain Description: FtsK Location: 2 382 6-2 4066 bp Feature: gene Location: 24293-26167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24659-25355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4659-2 5355 bp Feature: domain Description: HNHc Note: nucleases Location: 25895-26054 bp Feature: domain Description: HNHc Note: nucleases Location: 2 5895-2 6054 bp Feature: gene Location: 26761-27792 bp Feature: domain Description: FtsK_SpoIIIE Location: 27433-27673 bp Feature: domain Description: FtsK_SpoIIIE Location: 2 7433-2 7673 bp Feature: gene Location: 27846-28190 bp Feature: domain Description: RelB_DinJ Location: 28056-28182 bp Feature: domain Description: RelB_DinJ Location: 2 8056-2 8182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)