myRT

myRT report for GCA_001969645.1_ASM196964v1

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Seq: LSZZ01000115.1 Enterococcus faecium strain VREr7 VRE7_contig115, whole genome shotgun sequence (36641 bp)
Overview 1 RT 1: 31218-36605 bp Neighborhood of RT #1 [31218, 36619] TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 31218-31607 bp Feature: domain Description: TcpE Location: 31236-31536 bp Feature: domain Description: TcpE Location: 31 236-31 536 bp Feature: gene Location: 31594-33144 bp Feature: domain Description: AAA_10 Location: 32923-33106 bp Feature: domain Description: AAA_1 0 Location: 32923-331 06 bp Feature: gene Location: 33841-35667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34141-34840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 41 -34840 bp Feature: gene Location: 35801-36619 bp Feature: domain Description: AAA_10 Location: 35807-36605 bp Feature: domain Description: AAA_1 0 Location: 35807-36605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII

Seq: LSZZ01000003.1 Enterococcus faecium strain VREr7 VRE7_contig3, whole genome shotgun sequence (145093 bp)
Overview 1 RT 1: 12751-17492 bp Neighborhood of RT #1 [12751, 17569] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 12751-13254 bp Feature: domain Description: ArdA Location: 12769-13240 bp Feature: domain Description: ArdA Location: 12 769-132 40 bp Feature: gene Location: 13256-13465 bp Feature: gene Location: 13595-15505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13928-14666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1392 8-14666 bp Feature: domain Description: HNHc Note: nucleases Location: 15221-15386 bp Feature: domain Description: HNHc Note: nucleases Location: 152 2 1-15386 bp Feature: gene Location: 16014-16163 bp Feature: gene Location: 16385-17569 bp Feature: domain Description: HTH_XRE Location: 16415-16559 bp Feature: domain Description: HTH_XRE Location: 16415-16559 bp Feature: domain Description: Rol_Rep_N Location: 16592-16856 bp Feature: domain Description: Rol_Rep_N Location: 16592 -16856 bp Feature: domain Description: Rep_trans Location: 16880-17492 bp Feature: domain Description: Rep_trans Location: 16880-17492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: LSZZ01000081.1 Enterococcus faecium strain VREr7 VRE7_contig81, whole genome shotgun sequence (3269 bp)
Overview 1 RT 1: 35-2604 bp Neighborhood of RT #1 [35, 3266] HsdM RVT-AbiP2 Feature: gene Location: 35-1456 bp Feature: domain Description: HsdM Location: 56-1454 bp Feature: domain Description: HsdM Location: 56-1454 bp Feature: gene Location: 1794-3266 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2139-2604 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 213 9-2604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2