myRT

myRT report for GCA_001970035.1_ASM197003v1

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Seq: KZ160130.1 Escherichia coli N37058PS genomic scaffold N37058PS_contig_18, whole genome shotgun sequence (188100 bp)
Overview 1 RT 1: 100002-107849 bp Neighborhood of RT #1 [100002, 107860] 2A78 PRK15011 RVT-Retrons Prim_Zn_Ribbon COG3378 Feature: gene Location: 100002-100925 bp Ori: OMI44680.1 Feature: domain Description: 2A78 Location: 100056-100863 bp Feature: domain Description: 2A78 Location: 1 00056-1 00863 bp Feature: gene Location: 101036-102220 bp Ori: OMI44681.1 Feature: domain Description: PRK15011 Location: 101045-102218 bp Feature: domain Description: PRK1 501 1 Location: 1 01 045-1 0221 8 bp Feature: gene Location: 103038-103988 bp Ori: OMI44682.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103137-103728 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 031 37-1 03728 bp Feature: gene Location: 103975-104925 bp Feature: gene Location: 105527-107860 bp Ori: OMI44683.1 Feature: domain Description: Prim_Zn_Ribbon Location: 105617-105725 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 0561 7-1 05725 bp Feature: domain Description: COG3378 Location: 106337-107849 bp Feature: domain Description: COG3378 Location: 1 06337-1 07849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2A78 (TIGR00950), PRK15011 (sugar efflux transporter SetB), RVT-Retrons, Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase )

Seq: KZ160139.1 Escherichia coli N37058PS genomic scaffold N37058PS_contig_27, whole genome shotgun sequence (2370 bp)
Overview 1 RT 1: 672-1935 bp Neighborhood of RT #1 [672, 2180] RVT-GII GIIM Feature: gene Location: 672-2180 bp Ori: OMI43772.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)