myRT

myRT report for GCA_001974575.1_ASM197457v1

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Seq: MKKP01000158.1 Vibrio sp. 10N.261.45.E1 10N.261.45.E1_contig_24, whole genome shotgun sequence (108586 bp)
Overview 1 RT 1: 60683-66049 bp Neighborhood of RT #1 [60683, 66231] Cas6_I-F SUFU RVT-GII GIIM UvrD_C Feature: gene Location: 60683-61204 bp Feature: domain Description: Cas6_I-F Location: 60686-61196 bp Feature: domain Description: Cas6_I-F Location: 60686-61 1 96 bp Feature: gene Location: 62148-62705 bp Feature: domain Description: SUFU Location: 62256-62694 bp Feature: domain Description: SUFU Location: 62256-62694 bp Feature: gene Location: 62801-64147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63083-63701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63083-63701 bp Feature: domain Description: GIIM Note: maturase Location: 63746-63956 bp Feature: domain Description: GIIM Note: maturase Location: 63746-63956 bp Feature: gene Location: 64773-65288 bp Feature: gene Location: 65335-66231 bp Feature: domain Description: UvrD_C Location: 65689-66049 bp Feature: domain Description: UvrD_C Location: 65689-66049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas6_I-F (cl09835), SUFU (pfam05076), RVT-GII, GIIM (pfam08388), UvrD_C (pfam13361)

Seq: MKKP01000244.1 Vibrio sp. 10N.261.45.E1 10N.261.45.E1_contig_77, whole genome shotgun sequence (13416 bp)
Overview 1 RT 1: 88-5184 bp Neighborhood of RT #1 [88, 5184] TIGR02646 COG3950 RVT-Retrons PRK14875 Feature: gene Location: 88-873 bp Feature: domain Description: TIGR02646 Location: 205-655 bp Feature: domain Description: TIGR02 646 Location: 2 05-655 bp Feature: gene Location: 879-2504 bp Feature: domain Description: COG3950 Location: 1083-2463 bp Feature: domain Description: COG3950 Location: 1083-2 463 bp Feature: gene Location: 2494-3510 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2668-3259 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 668-32 59 bp Feature: gene Location: 4014-4424 bp Feature: domain Description: PRK14875 Location: 4122-4413 bp Feature: domain Description: PRK14875 Location: 412 2 -4413 bp Feature: gene Location: 4393-5184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK14875 (acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional), COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)