myRT

myRT report for GCA_001975465.1_ASM197546v1

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Seq: MPJE01000062.1 Chlorobium sp. KB01 1702, whole genome shotgun sequence (4196 bp)
Overview 1 RT 1: 2-4042 bp Neighborhood of RT #1 [2, 4125] RVT-GII Y1_Tnp COG2522 PRK13557 Feature: gene Location: 2-1585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 503-1193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 503-1 1 93 bp Feature: gene Location: 1731-2717 bp Feature: domain Description: Y1_Tnp Location: 1776-2094 bp Feature: domain Description: Y1 _Tnp Location: 1 776-2094 bp Feature: domain Description: COG2522 Location: 2565-2679 bp Feature: domain Description: COG2522 Location: 2565-2679 bp Feature: gene Location: 2719-4125 bp Feature: domain Description: PRK13557 Location: 2896-4042 bp Feature: domain Description: PRK1 3557 Location: 2896-4042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Y1_Tnp (pfam01797), COG2522 (Predicted transcriptional regulator ), PRK13557 (histidine kinase; Provisional)

Seq: MPJE01000075.1 Chlorobium sp. KB01 1715, whole genome shotgun sequence (12629 bp)
Overview 1 RT 1: 8759-12236 bp Neighborhood of RT #1 [8759, 12628] CitMHS_2 RVT-GII Feature: gene Location: 8759-10243 bp Feature: domain Description: CitMHS_2 Location: 8915-10235 bp Feature: domain Description: CitMHS_2 Location: 8915-102 35 bp Feature: gene Location: 10278-10664 bp Feature: gene Location: 11045-12628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11546-12236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11546-12 2 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CitMHS_2 (pfam16980), RVT-GII

Seq: MPJE01000078.1 Chlorobium sp. KB01 1718, whole genome shotgun sequence (6678 bp)
Overview 1 RT 1: 3534-6275 bp Neighborhood of RT #1 [3534, 6676] HTH_ARSR CRISPR_Cas2 RVT-CRISPR Y1_Tnp Feature: gene Location: 3534-3896 bp Feature: domain Description: HTH_ARSR Location: 3627-3819 bp Feature: domain Description: HTH_ARSR Location: 3 627-3 819 bp Feature: gene Location: 4135-4290 bp Feature: domain Description: CRISPR_Cas2 Location: 4144-4243 bp Feature: domain Description: CRISPR_Cas2 Location: 4144-4243 bp Feature: gene Location: 4327-5814 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4807-5413 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4807-5413 bp Feature: gene Location: 5912-6676 bp Feature: domain Description: Y1_Tnp Location: 5954-6275 bp Feature: domain Description: Y1_Tnp Location: 5954-6275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), CRISPR_Cas2 (pfam09827), RVT-CRISPR, Y1_Tnp (pfam01797)