myRT

myRT report for GCA_001977425.1_ASM197742v1

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Seq: LWVX01000210.1 Burkholderia pseudomallei strain RF4-BP80 RF4-BP80_289, whole genome shotgun sequence (47260 bp)
Overview 1 RT 1: 24052-28436 bp Neighborhood of RT #1 [24052, 28489] TnpB_IS66 COG3436 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C PRiA4_ORF3 Feature: gene Location: 24052-24399 bp Feature: domain Description: TnpB_IS66 Location: 24079-24367 bp Feature: domain Description: TnpB_IS66 Location: 24079-24367 bp Feature: gene Location: 24429-25034 bp Feature: domain Description: COG3436 Location: 24726-25035 bp Feature: domain Description: COG3436 Location: 24726-25035 bp Feature: gene Location: 25576-26838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25780-26437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25780-26437 bp Feature: domain Description: GIIM Note: maturase Location: 26515-26731 bp Feature: domain Description: GIIM Note: maturase Location: 2651 5-26731 bp Feature: gene Location: 26875-27852 bp Feature: domain Description: DDE_Tnp_IS66 Location: 26893-27697 bp Feature: domain Description: DDE_Tnp_IS66 Location: 26893-27697 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 27718-27829 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2771 8-27829 bp Feature: gene Location: 27893-28489 bp Feature: domain Description: PRiA4_ORF3 Location: 27917-28436 bp Feature: domain Description: PRiA4_ORF3 Location: 2791 7-28436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PRiA4_ORF3 (pfam07929)