myRT

myRT report for GCA_001981455.1_ASM198145v1

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Seq: MTST01000005.1 Leptospira santarosai serovar Grippotyphosa strain M72/6-6 Contig_3, whole genome shotgun sequence (222695 bp)
Overview 1 RT 1: 1-3858 bp Neighborhood of RT #1 [1, 3923] COG3666 RVT-GII GIIM DUF1016_N YncB Feature: gene Location: 1-689 bp Ori: ONF87167.1 Feature: domain Description: COG3666 Location: 13-454 bp Feature: domain Description: COG3666 Location: 1 3-454 bp Feature: gene Location: 910-2166 bp Ori: ONF87168.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1123-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 23-1 780 bp Feature: domain Description: GIIM Note: maturase Location: 1864-2092 bp Feature: domain Description: GIIM Note: maturase Location: 1 864-2092 bp Feature: gene Location: 2611-2874 bp Feature: gene Location: 2937-3923 bp Ori: ONF87002.1 Feature: domain Description: DUF1016_N Location: 2973-3363 bp Feature: domain Description: DUF1 01 6_N Location: 2973-3363 bp Feature: domain Description: YncB Location: 3543-3858 bp Feature: domain Description: YncB Location: 3543-3858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), RVT-GII, GIIM (pfam08388), DUF1016_N (pfam17761), YncB (COG1525)

Seq: MTST01000004.1 Leptospira santarosai serovar Grippotyphosa strain M72/6-6 Contig_6, whole genome shotgun sequence (228162 bp)
Overview 1 RT 1: 101510-106448 bp Neighborhood of RT #1 [101510, 106495] FecR RVT-GII GIIM S1-P1_nuclease COG3415 Feature: gene Location: 101510-102214 bp Ori: ONF87432.1 Feature: domain Description: FecR Location: 101681-101996 bp Feature: domain Description: FecR Location: 101681-101996 bp Feature: gene Location: 102237-102516 bp Feature: gene Location: 102874-104178 bp Ori: ONF87433.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103183-103807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103183-103807 bp Feature: domain Description: GIIM Note: maturase Location: 103879-104083 bp Feature: domain Description: GIIM Note: maturase Location: 103879-104083 bp Feature: gene Location: 104597-105475 bp Ori: ONF87434.1 Feature: domain Description: S1-P1_nuclease Location: 104675-105461 bp Feature: domain Description: S1-P1_nuclease Location: 104675-105461 bp Feature: gene Location: 105992-106495 bp Ori: ONF87435.1 Feature: domain Description: COG3415 Location: 106031-106448 bp Feature: domain Description: COG3415 Location: 106031-106448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FecR (pfam04773), RVT-GII, GIIM (pfam08388), S1-P1_nuclease (pfam02265), COG3415 (Transposase )

Seq: MTST01000035.1 Leptospira santarosai serovar Grippotyphosa strain M72/6-6 Contig_36, whole genome shotgun sequence (15869 bp)
Overview 1 RT 1: 1-1610 bp Neighborhood of RT #1 [1, 1630] RVT-GII GIIM DUF4279 Feature: gene Location: 1-750 bp Ori: ONF83037.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-3 79 bp Feature: domain Description: GIIM Note: maturase Location: 451-655 bp Feature: domain Description: GIIM Note: maturase Location: 451-655 bp Feature: gene Location: 921-1067 bp Feature: gene Location: 1196-1630 bp Ori: ONF83038.1 Feature: domain Description: DUF4279 Location: 1268-1610 bp Feature: domain Description: DUF4279 Location: 1268-1610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4279 (pfam14106)

Seq: MTST01000019.1 Leptospira santarosai serovar Grippotyphosa strain M72/6-6 Contig_21, whole genome shotgun sequence (61280 bp)
Overview 1 RT 1: 17312-25134 bp Neighborhood of RT #1 [17312, 25134] RVT-GII GIIM Feature: gene Location: 17312-17815 bp Feature: gene Location: 18274-18501 bp Feature: gene Location: 18593-19939 bp Ori: ONF84361.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18926-19586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18926-19586 bp Feature: domain Description: GIIM Note: maturase Location: 19667-19859 bp Feature: domain Description: GIIM Note: maturase Location: 19667-19859 bp Feature: gene Location: 20460-21281 bp Feature: gene Location: 21475-25134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MTST01000018.1 Leptospira santarosai serovar Grippotyphosa strain M72/6-6 Contig_20, whole genome shotgun sequence (71972 bp)
Overview 1 RT 1: 5706-13380 bp Neighborhood of RT #1 [5706, 13380] DUF932 AE_Prim_S_like RVT-UG28b Feature: gene Location: 5706-6485 bp Ori: ONF84543.1 Feature: domain Description: DUF932 Location: 5772-6399 bp Feature: domain Description: DUF932 Location: 5 772-6399 bp Feature: gene Location: 6489-8104 bp Feature: domain Description: AE_Prim_S_like Location: 6813-7038 bp Feature: domain Description: AE_Prim_S_like Location: 6813-7038 bp Feature: gene Location: 8811-10568 bp Ori: ONF84596.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 9246-9960 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 9246-9960 bp Feature: gene Location: 10652-11719 bp Feature: gene Location: 12370-13380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), AE_Prim_S_like (cl01287), RVT-UG28b