myRT

myRT report for GCA_001982805.1_ASM198280v1

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Seq: MLKK01000030.1 Bacillus cereus strain MOD1_Bc107 Bc107_MED11C_contig_30, whole genome shotgun sequence (19780 bp)
Overview 1 RT 1: 64-4983 bp Neighborhood of RT #1 [64, 4983] RVT-AbiK PinE Feature: gene Location: 64-252 bp Feature: gene Location: 414-656 bp Feature: gene Location: 1112-2836 bp Ori: ONG98987.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1586-1976 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 586-1 976 bp Feature: gene Location: 3070-3654 bp Ori: ONG98988.1 Feature: domain Description: PinE Location: 3073-3649 bp Feature: domain Description: PinE Location: 3073-3649 bp Feature: gene Location: 4105-4983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PinE (COG1961)

Seq: MLKK01000123.1 Bacillus cereus strain MOD1_Bc107 Bc107_MED11C_contig_123, whole genome shotgun sequence (34636 bp)
Overview 1 RT 1: 6279-11506 bp 2 RT 2: 16029-20319 bp Neighborhood of RT #1 [6279, 11511] COG4712 RVT-GII beta_clamp Neighborhood of RT #2 [16029, 20319] E1_enzyme_family RVT-GII Intron_maturas2 HNHc E1_enzyme_family Feature: gene Location: 6279-6674 bp Feature: gene Location: 6697-7053 bp Ori: ONG91073.1 Feature: domain Description: COG4712 Location: 6706-7048 bp Feature: domain Description: COG4712 Location: 6706-7048 bp Feature: gene Location: 7815-9713 bp Ori: ONG91096.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8130-8832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8130-8832 bp Feature: gene Location: 9791-10318 bp Feature: gene Location: 10399-11511 bp Ori: ONG91075.1 Feature: domain Description: beta_clamp Location: 10402-11506 bp Feature: domain Description: beta_clamp Location: 10402 -11506 bp Feature: gene Location: 16029-16430 bp Feature: gene Location: 16443-16625 bp Ori: ONG91083.1 Feature: domain Description: E1_enzyme_family Location: 16491-16611 bp Feature: domain Description: E1_enzyme_family Location: 16491-16611 bp Feature: gene Location: 17194-19134 bp Ori: ONG91084.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17524-18361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1752 4-18361 bp Feature: domain Description: Intron_maturas2 Location: 18499-18805 bp Feature: domain Description: Intron_maturas2 Location: 18499-18805 bp Feature: domain Description: HNHc Note: nucleases Location: 18928-19081 bp Feature: domain Description: HNHc Note: nucleases Location: 1892 8-19081 bp Feature: gene Location: 19251-19928 bp Feature: domain Description: E1_enzyme_family Location: 19254-19779 bp Feature: domain Description: E1_enzyme_family Location: 192 54-19779 bp Feature: gene Location: 19948-20319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4712 (Uncharacterized protein ), RVT-GII, beta_clamp (cl29549), E1_enzyme_family (cl22428), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MLKK01000052.1 Bacillus cereus strain MOD1_Bc107 Bc107_MED11C_contig_52, whole genome shotgun sequence (91883 bp)
Overview 1 RT 1: 9491-15730 bp Neighborhood of RT #1 [9491, 15732] DUF2085 PRK12451 RVT-GII Intron_maturas2 HNHc SAM_MT YphP_YqiW Feature: gene Location: 9491-9820 bp Ori: ONG96015.1 Feature: domain Description: DUF2085 Location: 9524-9785 bp Feature: domain Description: DUF2085 Location: 9524-9785 bp Feature: gene Location: 9935-11623 bp Ori: ONG96016.1 Feature: domain Description: PRK12451 Location: 9938-11621 bp Feature: domain Description: PRK12451 Location: 993 8-11621 bp Feature: gene Location: 12249-14066 bp Ori: ONG96017.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12513-13344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12513 -13 3 44 bp Feature: domain Description: Intron_maturas2 Location: 13422-13716 bp Feature: domain Description: Intron_maturas2 Location: 13 422-13 716 bp Feature: domain Description: HNHc Note: nucleases Location: 13863-14040 bp Feature: domain Description: HNHc Note: nucleases Location: 13 863 -14040 bp Feature: gene Location: 14682-15248 bp Ori: ONG96018.1 Feature: domain Description: SAM_MT Location: 14805-15237 bp Feature: domain Description: SAM_MT Location: 14805-1523 7 bp Feature: gene Location: 15298-15732 bp Ori: ONG96019.1 Feature: domain Description: YphP_YqiW Location: 15322-15730 bp Feature: domain Description: YphP_YqiW Location: 153 22-1573 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2085 (pfam09858), PRK12451 (arginyl-tRNA synthetase; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SAM_MT (pfam04445), YphP_YqiW (TIGR04191)

Seq: MLKK01000125.1 Bacillus cereus strain MOD1_Bc107 Bc107_MED11C_contig_125, whole genome shotgun sequence (2370 bp)
Overview 1 RT 1: 117-1410 bp Neighborhood of RT #1 [117, 1763] RVT_N RVT-GII GIIM Feature: gene Location: 117-1763 bp Ori: ONG91016.1 Feature: domain Description: RVT_N Location: 159-396 bp Feature: domain Description: RVT_N Location: 159-396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 450-1110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 50-1110 bp Feature: domain Description: GIIM Note: maturase Location: 1179-1410 bp Feature: domain Description: GIIM Note: maturase Location: 1179-14 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MLKK01000153.1 Bacillus cereus strain MOD1_Bc107 Bc107_MED11C_contig_153, whole genome shotgun sequence (2541 bp)
Overview 1 RT 1: 116-1832 bp Neighborhood of RT #1 [116, 1948] RVT-GII HNHc Feature: gene Location: 116-1948 bp Ori: ONG89522.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1121 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-1832 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-1832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MLKK01000157.1 Bacillus cereus strain MOD1_Bc107 Bc107_MED11C_contig_157, whole genome shotgun sequence (26653 bp)
Overview 1 RT 1: 120-9533 bp Neighborhood of RT #1 [120, 9533] RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Feature: gene Location: 120-2048 bp Ori: ONG89157.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441-1176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441-1176 bp Feature: domain Description: HNHc Note: nucleases Location: 1767-1932 bp Feature: domain Description: HNHc Note: nucleases Location: 176 7-1932 bp Feature: gene Location: 2217-8186 bp Ori: ONG89158.1 Feature: domain Description: B_ant_repeat Location: 2226-2364 bp Feature: domain Description: B_ant_repeat Location: 2226 -236 4 bp Feature: domain Description: B_ant_repeat Location: 2601-2754 bp Feature: domain Description: B_ant_repeat Location: 26 01-2754 bp Feature: domain Description: B_ant_repeat Location: 2991-3144 bp Feature: domain Description: B_ant_repeat Location: 2991-3144 bp Feature: domain Description: B_ant_repeat Location: 3384-3537 bp Feature: domain Description: B_ant_repeat Location: 3384-3537 bp Feature: domain Description: B_ant_repeat Location: 3780-3936 bp Feature: domain Description: B_ant_repeat Location: 3780-3936 bp Feature: domain Description: B_ant_repeat Location: 4176-4332 bp Feature: domain Description: B_ant_repeat Location: 4176 -4332 bp Feature: domain Description: B_ant_repeat Location: 4572-4728 bp Feature: domain Description: B_ant_repeat Location: 4572-4728 bp Feature: domain Description: B_ant_repeat Location: 4968-5121 bp Feature: domain Description: B_ant_repeat Location: 496 8-5121 bp Feature: domain Description: B_ant_repeat Location: 5364-5520 bp Feature: domain Description: B_ant_repeat Location: 536 4-5520 bp Feature: domain Description: B_ant_repeat Location: 5760-5916 bp Feature: domain Description: B_ant_repeat Location: 576 0-5916 bp Feature: domain Description: B_ant_repeat Location: 6156-6312 bp Feature: domain Description: B_ant_repeat Location: 6 156 -6 312 bp Feature: domain Description: B_ant_repeat Location: 6552-6705 bp Feature: domain Description: B_ant_repeat Location: 6 552-6 705 bp Feature: domain Description: B_ant_repeat Location: 6948-7104 bp Feature: domain Description: B_ant_repeat Location: 6 948-7104 bp Feature: domain Description: B_ant_repeat Location: 7344-7500 bp Feature: domain Description: B_ant_repeat Location: 7344-7500 bp Feature: domain Description: B_ant_repeat Location: 7740-7893 bp Feature: domain Description: B_ant_repeat Location: 7740-7893 bp Feature: gene Location: 8463-9533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), B_ant_repeat (TIGR01451)