myRT

myRT report for GCA_001982935.1_ASM198293v1

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Seq: MLKI01000043.1 Bacillus cereus strain MOD1_Bc106 Bc106_MED11B_contig_43, whole genome shotgun sequence (38139 bp)
Overview 1 RT 1: 17958-23124 bp Neighborhood of RT #1 [17958, 23180] YugN amiF RVT-GII HNHc amiF caa3_CtaG Feature: gene Location: 17958-18323 bp Feature: domain Description: YugN Location: 17976-18225 bp Feature: domain Description: YugN Location: 1 7976-1 8225 bp Feature: gene Location: 18370-18993 bp Feature: domain Description: amiF Location: 18373-18988 bp Feature: domain Description: amiF Location: 1 8373-1 8988 bp Feature: gene Location: 19110-20942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19410-20115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 941 0-201 1 5 bp Feature: domain Description: HNHc Note: nucleases Location: 20694-20826 bp Feature: domain Description: HNHc Note: nucleases Location: 20694-20826 bp Feature: gene Location: 21676-22047 bp Feature: domain Description: amiF Location: 21679-22048 bp Feature: domain Description: amiF Location: 21 679-22048 bp Feature: gene Location: 22275-23180 bp Feature: domain Description: caa3_CtaG Location: 22284-23124 bp Feature: domain Description: caa3_CtaG Location: 22284-231 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YugN (pfam08868), amiF (PRK13287), RVT-GII, HNHc (smart00507), caa3_CtaG (TIGR02737)

Seq: MLKI01000013.1 Bacillus cereus strain MOD1_Bc106 Bc106_MED11B_contig_13, whole genome shotgun sequence (369353 bp)
Overview 1 RT 1: 104729-111176 bp Neighborhood of RT #1 [104729, 111580] YphP_YqiW SAM_MT RVT-GII Intron_maturas2 HNHc PRK12451 Methyltransf_31 Feature: gene Location: 104729-105163 bp Feature: domain Description: YphP_YqiW Location: 104753-105161 bp Feature: domain Description: YphP_YqiW Location: 104753-105161 bp Feature: gene Location: 105213-105779 bp Feature: domain Description: SAM_MT Location: 105336-105768 bp Feature: domain Description: SAM_MT Location: 105336-105768 bp Feature: gene Location: 106395-108212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106659-107490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106659-107490 bp Feature: domain Description: Intron_maturas2 Location: 107571-107862 bp Feature: domain Description: Intron_maturas2 Location: 107571-107862 bp Feature: domain Description: HNHc Note: nucleases Location: 108009-108186 bp Feature: domain Description: HNHc Note: nucleases Location: 108009-108186 bp Feature: gene Location: 108838-110526 bp Feature: domain Description: PRK12451 Location: 108841-110524 bp Feature: domain Description: PRK12 451 Location: 108841-11052 4 bp Feature: gene Location: 110702-111580 bp Feature: domain Description: Methyltransf_31 Location: 110813-111176 bp Feature: domain Description: Methyltransf_31 Location: 110813-111176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YphP_YqiW (TIGR04191), SAM_MT (pfam04445), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK12451 (arginyl-tRNA synthetase; Reviewed), Methyltransf_31 (pfam13847)

Seq: MLKI01000046.1 Bacillus cereus strain MOD1_Bc106 Bc106_MED11B_contig_46, whole genome shotgun sequence (68110 bp)
Overview 1 RT 1: 22840-32399 bp Neighborhood of RT #1 [22840, 32399] DEXDc RVT_N RVT-GII GIIM HNH RVT-GII HNHc Feature: gene Location: 22840-23031 bp Feature: gene Location: 23091-25676 bp Feature: domain Description: DEXDc Location: 23868-24822 bp Feature: domain Description: DEXDc Location: 23 868-24822 bp Feature: gene Location: 26248-28059 bp Feature: RT Description: RVT_N Location: 26302-26548 bp Feature: RT Description: RVT_N Location: 263 02-26548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26602-27256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26602-27256 bp Feature: domain Description: GIIM Note: maturase Location: 27319-27553 bp Feature: domain Description: GIIM Note: maturase Location: 273 19-27553 bp Feature: domain Description: HNH Note: nucleases Location: 27793-27928 bp Feature: domain Description: HNH Note: nucleases Location: 27793 -27928 bp Feature: gene Location: 28923-30809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29235-29973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2923 5-29973 bp Feature: domain Description: HNHc Note: nucleases Location: 30552-30699 bp Feature: domain Description: HNHc Note: nucleases Location: 3 0552-3 0699 bp Feature: gene Location: 30929-31684 bp Feature: gene Location: 31701-32399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), HNHc (smart00507)

Seq: MLKI01000008.1 Bacillus cereus strain MOD1_Bc106 Bc106_MED11B_contig_8, whole genome shotgun sequence (165643 bp)
Overview 1 RT 1: 14107-18621 bp 2 RT 2: 24428-29660 bp 3 RT 3: 34162-43193 bp 4 RT 4: 97867-107573 bp Neighborhood of RT #1 [14107, 18644] HEPN RVT-GII NT_KNTase_like Neighborhood of RT #2 [24428, 29660] beta_clamp RVT-GII COG4712 Neighborhood of RT #3 [34162, 43193] rpsA nuc_hydro RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Neighborhood of RT #4 [97867, 107573] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 14107-14682 bp Feature: gene Location: 14967-15410 bp Feature: domain Description: HEPN Location: 15021-15369 bp Feature: domain Description: HEPN Location: 15021-15369 bp Feature: gene Location: 15556-17487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15877-16612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15877-16612 bp Feature: gene Location: 17484-17687 bp Feature: gene Location: 18246-18644 bp Feature: domain Description: NT_KNTase_like Location: 18321-18621 bp Feature: domain Description: NT_KNTase_like Location: 18321-18621 bp Feature: gene Location: 24428-25540 bp Feature: domain Description: beta_clamp Location: 24431-25535 bp Feature: domain Description: beta_clamp Location: 24 4 31-25535 bp Feature: gene Location: 25621-26148 bp Feature: gene Location: 26226-28124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26541-27243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2654 1-2724 3 bp Feature: gene Location: 28886-29242 bp Feature: domain Description: COG4712 Location: 28895-29237 bp Feature: domain Description: COG4 712 Location: 28895-29237 bp Feature: gene Location: 29283-29660 bp Feature: gene Location: 34162-35145 bp Feature: domain Description: rpsA Location: 34429-34966 bp Feature: domain Description: rpsA Location: 34 4 29-34 966 bp Feature: gene Location: 35760-36710 bp Feature: domain Description: nuc_hydro Location: 35775-36681 bp Feature: domain Description: nuc_hydro Location: 35775-36681 bp Feature: gene Location: 37430-39076 bp Feature: RT Description: RVT_N Location: 37472-37709 bp Feature: RT Description: RVT_N Location: 374 72-37709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37763-38423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37763-384 23 bp Feature: domain Description: GIIM Note: maturase Location: 38492-38723 bp Feature: domain Description: GIIM Note: maturase Location: 384 92-38723 bp Feature: gene Location: 39289-42789 bp Feature: domain Description: TraG-D_C Location: 40906-41266 bp Feature: domain Description: TraG-D_C Location: 4 0906-4 1266 bp Feature: domain Description: Ftsk_gamma Location: 41674-41851 bp Feature: domain Description: Ftsk_gamma Location: 4 1674 -4 1851 bp Feature: domain Description: Ftsk_gamma Location: 41983-42118 bp Feature: domain Description: Ftsk_gamma Location: 4 1983-4 2118 bp Feature: gene Location: 42807-43193 bp Feature: gene Location: 97867-98781 bp Feature: gene Location: 98784-99752 bp Feature: domain Description: TraC-F-type Location: 99204-99678 bp Feature: domain Description: TraC-F-type Location: 99204 -99678 bp Feature: gene Location: 100471-102303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100771-101476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100771-1014 76 bp Feature: domain Description: HNHc Note: nucleases Location: 102055-102187 bp Feature: domain Description: HNHc Note: nucleases Location: 102055-102187 bp Feature: gene Location: 102420-103562 bp Feature: domain Description: TraC-F-type Location: 102423-103401 bp Feature: domain Description: TraC-F-type Location: 1024 23-1034 01 bp Feature: gene Location: 103593-107573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN (smart00748), RVT-GII, NT_KNTase_like (cd05403), beta_clamp (cl29549), COG4712 (Uncharacterized protein ), rpsA (TIGR00717), nuc_hydro (cl00226), RVT_N (pfam13655), GIIM (pfam08388), TraG-D_C (pfam12696)
Ftsk_gamma (smart00843), HNHc (smart00507), TraC-F-type (TIGR02746)