myRT

myRT report for GCA_001983215.1_ASM198321v1

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Seq: MOWP01000032.1 Frankia sp. CcI49 contig_31, whole genome shotgun sequence (260231 bp)
Overview 1 RT 1: 242354-254734 bp Neighborhood of RT #1 [242354, 254757] KOG3957 KOG3957 AcoB RVT-GII GIIM RVT-GII GIIM STKc_PknB_like TOMM_kin_cyc GAF_2 GAF_2 PleD Feature: gene Location: 242354-242701 bp Feature: domain Description: KOG3957 Location: 242360-242480 bp Feature: domain Description: KOG3957 Location: 242360-242480 bp Feature: domain Description: KOG3957 Location: 242507-242618 bp Feature: domain Description: KOG3957 Location: 242507-24261 8 bp Feature: gene Location: 243038-243271 bp Feature: domain Description: AcoB Location: 243056-243164 bp Feature: domain Description: AcoB Location: 243056-2431 64 bp Feature: gene Location: 244140-245240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244194-244851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2441 94-244851 bp Feature: domain Description: GIIM Note: maturase Location: 244944-245139 bp Feature: domain Description: GIIM Note: maturase Location: 244944-2451 39 bp Feature: gene Location: 245317-246594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245551-246211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245551 -24621 1 bp Feature: domain Description: GIIM Note: maturase Location: 246295-246496 bp Feature: domain Description: GIIM Note: maturase Location: 246295-246496 bp Feature: gene Location: 247996-248784 bp Feature: gene Location: 249487-254757 bp Feature: domain Description: STKc_PknB_like Location: 249526-250270 bp Feature: domain Description: STKc_PknB_like Location: 249526-250270 bp Feature: domain Description: TOMM_kin_cyc Location: 250342-251554 bp Feature: domain Description: TOMM_kin_cyc Location: 250342-251 554 bp Feature: domain Description: GAF_2 Location: 253282-253717 bp Feature: domain Description: GAF_2 Location: 253282-25371 7 bp Feature: domain Description: GAF_2 Location: 253825-254218 bp Feature: domain Description: GAF_2 Location: 253825-25421 8 bp Feature: domain Description: PleD Location: 254230-254734 bp Feature: domain Description: PleD Location: 254230-254734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG3957 (KOG3957, Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase ), AcoB (COG0022), RVT-GII, GIIM (pfam08388), STKc_PknB_like (cd14014), TOMM_kin_cyc (TIGR03903), GAF_2 (pfam13185), PleD (COG3706)