myRT

myRT report for GCA_001984275.1_ASM198427v1

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Seq: MUJP01000005.1 Burkholderia cenocepacia strain VC7604 VC7604_contig30, whole genome shotgun sequence (3297374 bp)
Overview 1 RT 1: 1873711-1879396 bp 2 RT 2: 3271929-3278181 bp Neighborhood of RT #1 [1873711, 1879440] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Neighborhood of RT #2 [3271929, 3278201] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 MlaC Feature: gene Location: 1873711-1874223 bp Feature: domain Description: SnoaL_4 Location: 1873732-1874101 bp Feature: domain Description: SnoaL_4 Location: 1 873732-1 8741 01 bp Feature: gene Location: 1874276-1874992 bp Feature: domain Description: EthD Location: 1874342-1874528 bp Feature: domain Description: EthD Location: 1 874342-1 874528 bp Feature: domain Description: EthD Location: 1874666-1874939 bp Feature: domain Description: EthD Location: 1 874666-1 874939 bp Feature: gene Location: 1875089-1876330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1875281-1875899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 875281 -1 875899 bp Feature: domain Description: GIIM Note: maturase Location: 1875950-1876154 bp Feature: domain Description: GIIM Note: maturase Location: 1 875950-1 8761 54 bp Feature: gene Location: 1876929-1878512 bp Feature: domain Description: PRK06498 Location: 1876932-1878510 bp Feature: domain Description: PRK06498 Location: 1 876932-1 87851 0 bp Feature: gene Location: 1878919-1879440 bp Feature: domain Description: YeaK Location: 1878940-1879396 bp Feature: domain Description: YeaK Location: 1 878940-1 879396 bp Feature: gene Location: 3271929-3273449 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3271971-3273384 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3271 971 -3273384 bp Feature: gene Location: 3273595-3274233 bp Feature: domain Description: AcrR Location: 3273658-3274219 bp Feature: domain Description: AcrR Location: 3273658-327421 9 bp Feature: gene Location: 3274323-3275720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3274656-3275274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3274656-3275274 bp Feature: domain Description: GIIM Note: maturase Location: 3275325-3275535 bp Feature: domain Description: GIIM Note: maturase Location: 3275325-3275535 bp Feature: gene Location: 3275885-3276919 bp Feature: domain Description: COG3547 Location: 3275900-3276863 bp Feature: domain Description: COG3547 Location: 3275900-3276863 bp Feature: gene Location: 3277605-3278201 bp Feature: domain Description: MlaC Location: 3277695-3278181 bp Feature: domain Description: MlaC Location: 3277695-32781 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336), MFS_MMR_MDR_like (cd17504), AcrR (COG1309), COG3547 (Transposase ), MlaC (pfam05494)