myRT

myRT report for GCA_001984325.1_ASM198432v1

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Seq: MUJO01000007.1 Burkholderia cenocepacia strain VC4558 VC4558_contig54, whole genome shotgun sequence (1106954 bp)
Overview 1 RT 1: 983054-986869 bp Neighborhood of RT #1 [983054, 986874] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 983054-983383 bp Feature: domain Description: Histone_HNS Location: 983075-983312 bp Feature: domain Description: Histone_HNS Location: 983075-98331 2 bp Feature: gene Location: 983530-983736 bp Feature: gene Location: 983709-985058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 984174-984810 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9841 74-98481 0 bp Feature: gene Location: 985312-985884 bp Feature: domain Description: FIN Location: 985498-985849 bp Feature: domain Description: FIN Location: 985498-985849 bp Feature: gene Location: 986119-986874 bp Feature: domain Description: his_ut_repres Location: 986197-986869 bp Feature: domain Description: his_ut_repres Location: 9861 97-986869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUJO01000009.1 Burkholderia cenocepacia strain VC4558 VC4558_contig60.61, whole genome shotgun sequence (3296054 bp)
Overview 1 RT 1: 1876536-1882221 bp 2 RT 2: 3270609-3276861 bp Neighborhood of RT #1 [1876536, 1882265] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Neighborhood of RT #2 [3270609, 3276881] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 MlaC Feature: gene Location: 1876536-1877048 bp Feature: domain Description: SnoaL_4 Location: 1876557-1876926 bp Feature: domain Description: SnoaL_4 Location: 1876557-187692 6 bp Feature: gene Location: 1877101-1877817 bp Feature: domain Description: EthD Location: 1877167-1877353 bp Feature: domain Description: EthD Location: 1877167-1877353 bp Feature: domain Description: EthD Location: 1877491-1877764 bp Feature: domain Description: EthD Location: 1877491-1877764 bp Feature: gene Location: 1877914-1879155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1878106-1878724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1878106-187872 4 bp Feature: domain Description: GIIM Note: maturase Location: 1878775-1878979 bp Feature: domain Description: GIIM Note: maturase Location: 1878775-1878979 bp Feature: gene Location: 1879754-1881337 bp Feature: domain Description: PRK06498 Location: 1879757-1881335 bp Feature: domain Description: PRK06498 Location: 1879757-1881335 bp Feature: gene Location: 1881744-1882265 bp Feature: domain Description: YeaK Location: 1881765-1882221 bp Feature: domain Description: YeaK Location: 1881765-1882 2 2 1 bp Feature: gene Location: 3270609-3272129 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3270651-3272064 bp Feature: domain Description: MFS_MMR_MDR_like Location: 32 70651-32 72 064 bp Feature: gene Location: 3272275-3272913 bp Feature: domain Description: AcrR Location: 3272338-3272899 bp Feature: domain Description: AcrR Location: 32 72 338-32 72 899 bp Feature: gene Location: 3273003-3274400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3273336-3273954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 73336-32 73954 bp Feature: domain Description: GIIM Note: maturase Location: 3274005-3274215 bp Feature: domain Description: GIIM Note: maturase Location: 32 74005-32 742 15 bp Feature: gene Location: 3274565-3275599 bp Feature: domain Description: COG3547 Location: 3274580-3275543 bp Feature: domain Description: COG3547 Location: 32 74580-32 75543 bp Feature: gene Location: 3276285-3276881 bp Feature: domain Description: MlaC Location: 3276375-3276861 bp Feature: domain Description: MlaC Location: 32 76375-32 76861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336), MFS_MMR_MDR_like (cd17504), AcrR (COG1309), COG3547 (Transposase ), MlaC (pfam05494)