myRT

myRT report for GCA_001984855.1_ASM198485v1

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Seq: MUIP01000046.1 Escherichia coli strain CF111 Contig_35, whole genome shotgun sequence (39286 bp)
Overview 1 RT 1: 9480-13362 bp Neighborhood of RT #1 [9480, 13367] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 9480-9938 bp Feature: domain Description: dut Location: 9486-9933 bp Feature: domain Description: dut Location: 9486-9933 bp Feature: gene Location: 10045-10641 bp Feature: domain Description: slmA Location: 10051-10627 bp Feature: domain Description: slmA Location: 1 0051 -1 0627 bp Feature: gene Location: 10687-11646 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10822-11371 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0822-1 1 371 bp Feature: gene Location: 11944-12585 bp Feature: domain Description: pyrE Location: 11947-12580 bp Feature: domain Description: pyrE Location: 1 1 947-1 2580 bp Feature: gene Location: 12651-13367 bp Feature: domain Description: rph Location: 12654-13362 bp Feature: domain Description: rph Location: 1 2654-1 3362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173), dut (TIGR00576)

Seq: MUIP01000031.1 Escherichia coli strain CF111 Contig_101, whole genome shotgun sequence (56334 bp)
Overview 1 RT 1: 1-3936 bp Neighborhood of RT #1 [1, 3947] RVT-GII RVT-GII GIIM PRK15452 ParE Feature: gene Location: 1-264 bp Feature: gene Location: 489-1262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819-1254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819-12 54 bp Feature: gene Location: 1353-1877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1362-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1362 -1437 bp Feature: domain Description: GIIM Note: maturase Location: 1485-1716 bp Feature: domain Description: GIIM Note: maturase Location: 1485-1716 bp Feature: gene Location: 2187-3548 bp Feature: domain Description: PRK15452 Location: 2190-3513 bp Feature: domain Description: PRK15452 Location: 2 190-3513 bp Feature: gene Location: 3651-3947 bp Feature: domain Description: ParE Location: 3663-3936 bp Feature: domain Description: ParE Location: 3663-3936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK15452 (putative protease; Provisional), ParE (COG3668)