myRT

myRT report for GCA_001988975.1_ASM198897v1

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Seq: CP015999.1 Burkholderia sp. KK1 chromosome I sequence (3241870 bp)
Overview 1 RT 1: 255230-262138 bp Neighborhood of RT #1 [255230, 262138] RVT-Retrons Feature: gene Location: 255230-256195 bp Feature: gene Location: 258018-258950 bp Feature: gene Location: 259405-260103 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 259411-259867 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25941 1 -259867 bp Feature: gene Location: 260319-261005 bp Feature: gene Location: 261761-262138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: CP016005.1 Burkholderia sp. KK1 plasmid pkk4 sequence (568203 bp)
Overview 1 RT 1: 34965-39868 bp Neighborhood of RT #1 [34965, 39868] PIN_T4-like H3TH_T4-like RVT-GII GIIM Feature: gene Location: 34965-35882 bp Feature: domain Description: PIN_T4-like Location: 34977-35166 bp Feature: domain Description: PIN_T4-like Location: 34977-35166 bp Feature: domain Description: H3TH_T4-like Location: 35430-35664 bp Feature: domain Description: H3TH_T4-like Location: 35430-35664 bp Feature: gene Location: 36063-36704 bp Feature: gene Location: 37147-38511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37480-38095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37480-38095 bp Feature: domain Description: GIIM Note: maturase Location: 38152-38353 bp Feature: domain Description: GIIM Note: maturase Location: 38152 -38353 bp Feature: gene Location: 38665-39306 bp Feature: gene Location: 39377-39868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_T4-like (cd09860), H3TH_T4-like (cd09899), RVT-GII, GIIM (pfam08388)

Seq: CP016004.1 Burkholderia sp. KK1 plasmid pkk3 sequence (292862 bp)
Overview 1 RT 1: 96693-103913 bp Neighborhood of RT #1 [96693, 104053] UvrD Nterm_IS4 DDE_Tnp_1 RVT-GII GIIM InsE PHA02517 RVT-GII Bactofilin Feature: gene Location: 96693-98417 bp Feature: domain Description: UvrD Location: 96705-98403 bp Feature: domain Description: UvrD Location: 96705-98403 bp Feature: gene Location: 98457-99785 bp Feature: domain Description: Nterm_IS4 Location: 98505-98781 bp Feature: domain Description: Nterm_IS4 Location: 98505-98781 bp Feature: domain Description: DDE_Tnp_1 Location: 98850-99516 bp Feature: domain Description: DDE_Tnp_1 Location: 98850-99516 bp Feature: gene Location: 100309-100812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100321-100393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003 21-1003 93 bp Feature: domain Description: GIIM Note: maturase Location: 100444-100660 bp Feature: domain Description: GIIM Note: maturase Location: 100444-100660 bp Feature: gene Location: 100862-101176 bp Feature: domain Description: InsE Location: 100877-101156 bp Feature: domain Description: InsE Location: 100877-101156 bp Feature: gene Location: 101209-102144 bp Feature: domain Description: PHA02517 Location: 101224-102004 bp Feature: domain Description: PHA02517 Location: 101224-102004 bp Feature: gene Location: 102179-102847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102506-102848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102506-102848 bp Feature: gene Location: 103333-103542 bp Feature: gene Location: 103601-104053 bp Feature: domain Description: Bactofilin Location: 103625-103913 bp Feature: domain Description: Bactofilin Location: 103 625-103 913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), UvrD (COG0210), Nterm_IS4 (pfam13006), DDE_Tnp_1 (pfam01609), Bactofilin (pfam04519)