myRT

myRT report for GCA_001989835.1_ASM198983v1

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Seq: CP011462.1 Vibrio anguillarum strain HI610 chromosome I sequence (3440457 bp)
Overview 1 RT 1: 515816-521706 bp 2 RT 2: 3229466-3236181 bp Neighborhood of RT #1 [515816, 521706] groES groEL RVT_N RVT-GII GIIM HNHc YegP Neighborhood of RT #2 [3229466, 3236603] DUF4123 RVT_N RVT-GII GIIM VgrG ACD DUF4123 Feature: gene Location: 515816-516106 bp Feature: domain Description: groES Location: 515819-516104 bp Feature: domain Description: groES Location: 51 581 9-51 61 04 bp Feature: gene Location: 516176-517810 bp Feature: domain Description: groEL Location: 516182-517799 bp Feature: domain Description: groEL Location: 51 61 82-51 7799 bp Feature: gene Location: 518933-520585 bp Feature: RT Description: RVT_N Location: 518978-519218 bp Feature: RT Description: RVT_N Location: 51 8978-51 921 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519266-519911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 9266-51 991 1 bp Feature: domain Description: GIIM Note: maturase Location: 519962-520196 bp Feature: domain Description: GIIM Note: maturase Location: 51 9962-5201 96 bp Feature: domain Description: HNHc Note: nucleases Location: 520412-520574 bp Feature: domain Description: HNHc Note: nucleases Location: 52041 2-520574 bp Feature: gene Location: 520692-520844 bp Feature: domain Description: YegP Location: 520695-520812 bp Feature: domain Description: YegP Location: 520695-52081 2 bp Feature: gene Location: 521149-521706 bp Feature: gene Location: 3229466-3230254 bp Feature: domain Description: DUF4123 Location: 3229487-3229817 bp Feature: domain Description: DUF41 23 Location: 3229487-322981 7 bp Feature: gene Location: 3230244-3231266 bp Feature: gene Location: 3231369-3232841 bp Feature: RT Description: RVT_N Location: 3231417-3231660 bp Feature: RT Description: RVT_N Location: 3231 41 7-3231 660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3231705-3232332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3231 705-3232332 bp Feature: domain Description: GIIM Note: maturase Location: 3232389-3232617 bp Feature: domain Description: GIIM Note: maturase Location: 3232389-323261 7 bp Feature: gene Location: 3233427-3235781 bp Feature: domain Description: VgrG Location: 3233430-3233964 bp Feature: domain Description: VgrG Location: 3233430-3233964 bp Feature: domain Description: ACD Location: 3234465-3235617 bp Feature: domain Description: ACD Location: 3234465-323561 7 bp Feature: gene Location: 3235806-3236603 bp Feature: domain Description: DUF4123 Location: 3235914-3236181 bp Feature: domain Description: DUF41 23 Location: 323591 4-32361 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), YegP (COG3422), DUF4123 (pfam13503), VgrG (COG3501), ACD (pfam16671)

Seq: CP011463.1 Vibrio anguillarum strain HI610 chromosome II sequence (1007765 bp)
Overview 1 RT 1: 854762-861636 bp Neighborhood of RT #1 [854762, 861647] CeuD PRK12440 RVT_N RVT-GII GIIM PRK10216 PRK10473 Feature: gene Location: 854762-855523 bp Feature: domain Description: CeuD Location: 854765-855515 bp Feature: domain Description: CeuD Location: 854765-855515 bp Feature: gene Location: 855853-857046 bp Feature: domain Description: PRK12440 Location: 855856-857044 bp Feature: domain Description: PRK12 440 Location: 855856-857044 bp Feature: gene Location: 857334-858806 bp Feature: RT Description: RVT_N Location: 857382-857625 bp Feature: RT Description: RVT_N Location: 857382 -85762 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857670-858297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857670-8582 97 bp Feature: domain Description: GIIM Note: maturase Location: 858360-858582 bp Feature: domain Description: GIIM Note: maturase Location: 858360-858582 bp Feature: gene Location: 859508-860464 bp Feature: domain Description: PRK10216 Location: 859511-860456 bp Feature: domain Description: PRK102 16 Location: 859511-860456 bp Feature: gene Location: 860439-861647 bp Feature: domain Description: PRK10473 Location: 860463-861636 bp Feature: domain Description: PRK10473 Location: 860463-861636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CeuD (COG4604), PRK12440 (acetate/propionate family kinase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK10216 (HTH-type transcriptional regulator YidZ), PRK10473 (MdtL family multidrug efflux MFS transporter)