myRT

myRT report for GCA_001989895.1_ASM198989v1

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Seq: CP011472.1 Vibrio anguillarum strain S2 2/9 chromosome I sequence (2979966 bp)
Overview 1 RT 1: 1013765-1018107 bp 2 RT 2: 2804070-2808640 bp Neighborhood of RT #1 [1013765, 1018107] toxin_TenpN RVT-Retrons Neighborhood of RT #2 [2804070, 2808837] StbD HNHc RVT_N RVT-GII GIIM DUF2971 T5orf172 Feature: gene Location: 1013765-1014037 bp Feature: gene Location: 1014294-1014773 bp Feature: domain Description: toxin_TenpN Location: 1014297-1014687 bp Feature: domain Description: toxin_TenpN Location: 1 01 4297-1 01 4687 bp Feature: gene Location: 1015681-1016538 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1015723-1016272 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 5723-1 01 6272 bp Feature: gene Location: 1016878-1017228 bp Feature: gene Location: 1017232-1018107 bp Feature: gene Location: 2804070-2804327 bp Feature: domain Description: StbD Location: 2804073-2804310 bp Feature: domain Description: StbD Location: 2804073-280431 0 bp Feature: gene Location: 2804519-2804896 bp Feature: domain Description: HNHc Note: nucleases Location: 2804573-2804747 bp Feature: domain Description: HNHc Note: nucleases Location: 2804573-2804747 bp Feature: gene Location: 2805440-2806912 bp Feature: RT Description: RVT_N Location: 2805488-2805731 bp Feature: RT Description: RVT_N Location: 2805488-2805731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2805776-2806403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2805776-2806403 bp Feature: domain Description: GIIM Note: maturase Location: 2806466-2806688 bp Feature: domain Description: GIIM Note: maturase Location: 2806466-2806688 bp Feature: gene Location: 2807192-2808013 bp Feature: domain Description: DUF2971 Location: 2807438-2807711 bp Feature: domain Description: DUF2971 Location: 2807438-280771 1 bp Feature: gene Location: 2808184-2808837 bp Feature: domain Description: T5orf172 Location: 2808430-2808640 bp Feature: domain Description: T5orf1 72 Location: 2808430-2808640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT toxin_TenpN (cd17493), RVT-Retrons, StbD (COG2161), HNHc (smart00507), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF2971 (pfam11185), T5orf172 (smart00974)