myRT

myRT report for GCA_001990025.1_ASM199002v1

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Seq: CP011476.1 Vibrio anguillarum strain 90-11-287 chromosome II sequence (1093463 bp)
Overview 1 RT 1: 1070237-1075545 bp Neighborhood of RT #1 [1070237, 1075583] Phage_holin_3_3 COG3547 RVT_N RVT-GII GIIM ASCH_yqfb_like ASCH_yqfb_like TrmB TrmB Feature: gene Location: 1070237-1070563 bp Feature: domain Description: Phage_holin_3_3 Location: 1070306-1070525 bp Feature: domain Description: Phage_holin_3_3 Location: 1 070306-1 070525 bp Feature: gene Location: 1070843-1071877 bp Feature: domain Description: COG3547 Location: 1070861-1071824 bp Feature: domain Description: COG3547 Location: 1 070861 -1 071 824 bp Feature: gene Location: 1072566-1074032 bp Feature: RT Description: RVT_N Location: 1072614-1072857 bp Feature: RT Description: RVT_N Location: 1 07261 4-1 072857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1072902-1073529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 072902-1 073529 bp Feature: domain Description: GIIM Note: maturase Location: 1073586-1073814 bp Feature: domain Description: GIIM Note: maturase Location: 1 073586-1 07381 4 bp Feature: gene Location: 1074496-1075158 bp Feature: domain Description: ASCH_yqfb_like Location: 1074514-1074592 bp Feature: domain Description: ASCH_yqfb_like Location: 1 07451 4-1 074592 bp Feature: domain Description: ASCH_yqfb_like Location: 1074883-1075090 bp Feature: domain Description: ASCH_yqfb_like Location: 1 074883-1 075090 bp Feature: gene Location: 1075221-1075583 bp Feature: domain Description: TrmB Location: 1075251-1075347 bp Feature: domain Description: TrmB Location: 1 075251 -1 075347 bp Feature: domain Description: TrmB Location: 1075434-1075545 bp Feature: domain Description: TrmB Location: 1 075434-1 075545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_3_3 (pfam16083), COG3547 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ASCH_yqfb_like (cd06552), TrmB (pfam01978)

Seq: CP011475.1 Vibrio anguillarum strain 90-11-287 chromosome I sequence (3060914 bp)
Overview 1 RT 1: 1708355-1713947 bp Neighborhood of RT #1 [1708355, 1713947] Ser_Recombinase Recombinase Zn_ribbon_recom RVT-Retrons Feature: gene Location: 1708355-1710220 bp Feature: domain Description: Ser_Recombinase Location: 1708394-1708835 bp Feature: domain Description: Ser_Recombinase Location: 1708394-1708835 bp Feature: domain Description: Recombinase Location: 1708988-1709258 bp Feature: domain Description: Recombinase Location: 1708988-17092 58 bp Feature: domain Description: Zn_ribbon_recom Location: 1709381-1709555 bp Feature: domain Description: Zn_ribbon_recom Location: 1709381-1709555 bp Feature: gene Location: 1710687-1711895 bp Feature: gene Location: 1712043-1713182 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1712283-1712910 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1712 2 83-1712 910 bp Feature: gene Location: 1713263-1713562 bp Feature: gene Location: 1713552-1713947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ser_Recombinase (cl02788), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-Retrons