myRT

myRT report for GCA_001990045.1_ASM199004v1

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Seq: CP010083.1 Vibrio anguillarum strain 91-7-154 chromosome II sequence (1132884 bp)
Overview 1 RT 1: 1053186-1058676 bp 2 RT 2: 1108047-1112057 bp Neighborhood of RT #1 [1053186, 1058678] Phage_holin_3_3 COG3547 RVT_N RVT-GII GIIM YcjX Neighborhood of RT #2 [1108047, 1112057] nirV Avd_like RVT-DGRs Feature: gene Location: 1053186-1053512 bp Feature: domain Description: Phage_holin_3_3 Location: 1053255-1053474 bp Feature: domain Description: Phage_holin_3_3 Location: 1 053255-1 053474 bp Feature: gene Location: 1053792-1054826 bp Feature: domain Description: COG3547 Location: 1053810-1054773 bp Feature: domain Description: COG3547 Location: 1 05381 0-1 054773 bp Feature: gene Location: 1055134-1056594 bp Feature: RT Description: RVT_N Location: 1055182-1055425 bp Feature: RT Description: RVT_N Location: 1 0551 82-1 055425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1055470-1056097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 055470-1 056097 bp Feature: domain Description: GIIM Note: maturase Location: 1056154-1056382 bp Feature: domain Description: GIIM Note: maturase Location: 1 0561 54-1 056382 bp Feature: gene Location: 1056968-1057153 bp Feature: gene Location: 1057299-1058678 bp Feature: domain Description: YcjX Location: 1057302-1058676 bp Feature: domain Description: YcjX Location: 1 057302-1 058676 bp Feature: gene Location: 1108047-1109270 bp Feature: domain Description: nirV Location: 1108458-1108854 bp Feature: domain Description: nirV Location: 1 1 08458-1 1 08854 bp Feature: gene Location: 1109338-1109694 bp Feature: domain Description: Avd_like Location: 1109362-1109662 bp Feature: domain Description: Avd_like Location: 1 1 09362-1 1 09662 bp Feature: gene Location: 1109691-1110968 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1110132-1110756 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 1 01 32-1 1 1 0756 bp Feature: gene Location: 1110961-1111257 bp Feature: gene Location: 1111329-1112057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_3_3 (pfam16083), COG3547 (Transposase ), RVT_N (pfam13655), GIIM (pfam08388), YcjX (COG3106), nirV (LOAD_nirV), Avd_like (cd16376)

Seq: CP010082.1 Vibrio anguillarum strain 91-7154 chromosome I sequence (3061930 bp)
Overview 1 RT 1: 1709259-1714851 bp Neighborhood of RT #1 [1709259, 1714851] Ser_Recombinase Recombinase Zn_ribbon_recom RVT-Retrons Feature: gene Location: 1709259-1711124 bp Feature: domain Description: Ser_Recombinase Location: 1709298-1709739 bp Feature: domain Description: Ser_Recombinase Location: 17092 98-1709739 bp Feature: domain Description: Recombinase Location: 1709892-1710162 bp Feature: domain Description: Recombinase Location: 1709892 -1710162 bp Feature: domain Description: Zn_ribbon_recom Location: 1710285-1710459 bp Feature: domain Description: Zn_ribbon_recom Location: 17102 85-1710459 bp Feature: gene Location: 1711591-1712799 bp Feature: gene Location: 1712947-1714086 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1713187-1713814 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1713187-1713814 bp Feature: gene Location: 1714167-1714466 bp Feature: gene Location: 1714456-1714851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ser_Recombinase (cl02788), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)