myRT

myRT report for GCA_001990335.1_ASM199033v1

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Seq: MUKZ01000028.1 Pseudomonas aeruginosa strain SCH_ABX18 ABX18_contig000028, whole genome shotgun sequence (41540 bp)
Overview 1 RT 1: 34920-39632 bp Neighborhood of RT #1 [34920, 39646] PRK09362 PinE RVT-Retrons 5-nucleotidase HTH_XRE Feature: gene Location: 34920-35630 bp Feature: domain Description: PRK09362 Location: 34923-35619 bp Feature: domain Description: PRK09362 Location: 34923-3561 9 bp Feature: gene Location: 35963-36175 bp Feature: domain Description: PinE Location: 35966-36149 bp Feature: domain Description: PinE Location: 35966-361 49 bp Feature: gene Location: 36528-37721 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36684-37266 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36684-37266 bp Feature: gene Location: 38454-39392 bp Feature: domain Description: 5-nucleotidase Location: 38568-39378 bp Feature: domain Description: 5-nucleotidase Location: 38568-39378 bp Feature: gene Location: 39425-39646 bp Feature: domain Description: HTH_XRE Location: 39461-39632 bp Feature: domain Description: HTH_XRE Location: 39461 -39632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), PinE (COG1961), RVT-Retrons, 5-nucleotidase (pfam06189), HTH_XRE (smart00530)

Seq: MUKZ01000004.1 Pseudomonas aeruginosa strain SCH_ABX18 ABX18_contig000004, whole genome shotgun sequence (479679 bp)
Overview 1 RT 1: 17669-21932 bp Neighborhood of RT #1 [17669, 21932] HigB VapI RVT-Retrons Feature: gene Location: 17669-17947 bp Feature: domain Description: HigB Location: 17672-17945 bp Feature: domain Description: HigB Location: 17672 -17945 bp Feature: gene Location: 17959-18264 bp Feature: domain Description: VapI Location: 17971-18250 bp Feature: domain Description: VapI Location: 17971-182 50 bp Feature: gene Location: 20170-21192 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20392-20926 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 0392 -2 092 6 bp Feature: gene Location: 21272-21607 bp Feature: gene Location: 21663-21932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HigB (COG4680), VapI (COG3093), RVT-Retrons