myRT

myRT report for GCA_001991325.1_ASM199132v1

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Seq: MUQT01000125.1 Burkholderia cenocepacia strain VC9612 VC9612_contig-6000011, whole genome shotgun sequence (255371 bp)
Overview 1 RT 1: 134678-138427 bp Neighborhood of RT #1 [134678, 138498] his_ut_repres FIN RVT-Retrons Histone_HNS Feature: gene Location: 134678-135433 bp Feature: domain Description: his_ut_repres Location: 134756-135428 bp Feature: domain Description: his_ut_repres Location: 1 34756-1 35428 bp Feature: gene Location: 135668-136240 bp Feature: domain Description: FIN Location: 135854-136205 bp Feature: domain Description: FIN Location: 1 35854-1 36205 bp Feature: gene Location: 136494-137843 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136959-137595 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 36959-1 37595 bp Feature: gene Location: 137816-138022 bp Feature: gene Location: 138169-138498 bp Feature: domain Description: Histone_HNS Location: 138190-138427 bp Feature: domain Description: Histone_HNS Location: 1 381 90-1 38427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816)

Seq: MUQT01000170.1 Burkholderia cenocepacia strain VC9612 VC9612_contig-2000015, whole genome shotgun sequence (61699 bp)
Overview 1 RT 1: 1-4844 bp Neighborhood of RT #1 [1, 4909] COG3547 RVT-GII GIIM AcrR MFS_MMR_MDR_like Feature: gene Location: 1-953 bp Feature: domain Description: COG3547 Location: 16-949 bp Feature: domain Description: COG3547 Location: 16-949 bp Feature: gene Location: 1118-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-2069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451-2 069 bp Feature: domain Description: GIIM Note: maturase Location: 2120-2330 bp Feature: domain Description: GIIM Note: maturase Location: 2 12 0-2 330 bp Feature: gene Location: 2605-3243 bp Feature: domain Description: AcrR Location: 2668-3229 bp Feature: domain Description: AcrR Location: 2 668-32 2 9 bp Feature: gene Location: 3389-4909 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3431-4844 bp Feature: domain Description: MFS_MMR_MDR_like Location: 3431-4844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), AcrR (COG1309), MFS_MMR_MDR_like (cd17504)

Seq: MUQT01000119.1 Burkholderia cenocepacia strain VC9612 VC9612_contig-11, whole genome shotgun sequence (124015 bp)
Overview 1 RT 1: 3730-9415 bp Neighborhood of RT #1 [3730, 9459] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3730-4242 bp Feature: domain Description: SnoaL_4 Location: 3751-4120 bp Feature: domain Description: SnoaL_4 Location: 3 751-4120 bp Feature: gene Location: 4295-5011 bp Feature: domain Description: EthD Location: 4361-4547 bp Feature: domain Description: EthD Location: 43 61-4547 bp Feature: domain Description: EthD Location: 4685-4958 bp Feature: domain Description: EthD Location: 4685-4958 bp Feature: gene Location: 5108-6349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5300-5918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 00-5918 bp Feature: domain Description: GIIM Note: maturase Location: 5969-6173 bp Feature: domain Description: GIIM Note: maturase Location: 5969-6173 bp Feature: gene Location: 6948-8531 bp Feature: domain Description: PRK06498 Location: 6951-8529 bp Feature: domain Description: PRK06498 Location: 6951-8529 bp Feature: gene Location: 8938-9459 bp Feature: domain Description: YeaK Location: 8959-9415 bp Feature: domain Description: YeaK Location: 8959-9415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)