myRT

myRT report for GCA_001991355.1_ASM199135v1

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Seq: MUQU01000098.1 Burkholderia cenocepacia strain VC10178 VC10178_contig-7000007, whole genome shotgun sequence (61136 bp)
Overview 1 RT 1: 56137-61071 bp Neighborhood of RT #1 [56137, 61127] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56137-57657 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56179-57592 bp Feature: domain Description: MFS_MMR_MDR_like Location: 561 79-57592 bp Feature: gene Location: 57803-58441 bp Feature: domain Description: AcrR Location: 57866-58427 bp Feature: domain Description: AcrR Location: 57866-58427 bp Feature: gene Location: 58531-59928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58864-59482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58864-59482 bp Feature: domain Description: GIIM Note: maturase Location: 59533-59743 bp Feature: domain Description: GIIM Note: maturase Location: 59533-59743 bp Feature: gene Location: 60093-61127 bp Feature: domain Description: COG3547 Location: 60108-61071 bp Feature: domain Description: COG3547 Location: 601 08-61 071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MUQU01000210.1 Burkholderia cenocepacia strain VC10178 VC10178_contig-11000015, whole genome shotgun sequence (263346 bp)
Overview 1 RT 1: 125888-129703 bp Neighborhood of RT #1 [125888, 129708] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125888-126217 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: domain Description: Histone_HNS Location: 12 5909-12 6146 bp Feature: gene Location: 126364-126570 bp Feature: gene Location: 126543-127892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 7008-12 7644 bp Feature: gene Location: 128146-128718 bp Feature: domain Description: FIN Location: 128332-128683 bp Feature: domain Description: FIN Location: 12 8332 -12 8683 bp Feature: gene Location: 128953-129708 bp Feature: domain Description: his_ut_repres Location: 129031-129703 bp Feature: domain Description: his_ut_repres Location: 12 9031-12 9703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: MUQU01000201.1 Burkholderia cenocepacia strain VC10178 VC10178_contig-2000015, whole genome shotgun sequence (19415 bp)
Overview 1 RT 1: 3725-9410 bp Neighborhood of RT #1 [3725, 9454] SnoaL_4 EthD EthD RVT-GII GIIM PRK06498 YeaK Feature: gene Location: 3725-4237 bp Feature: domain Description: SnoaL_4 Location: 3746-4115 bp Feature: domain Description: SnoaL_4 Location: 3 746-4115 bp Feature: gene Location: 4290-5006 bp Feature: domain Description: EthD Location: 4356-4542 bp Feature: domain Description: EthD Location: 43 56-4542 bp Feature: domain Description: EthD Location: 4680-4953 bp Feature: domain Description: EthD Location: 4680-4953 bp Feature: gene Location: 5103-6344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5295-5913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5295-5913 bp Feature: domain Description: GIIM Note: maturase Location: 5964-6168 bp Feature: domain Description: GIIM Note: maturase Location: 5964-6168 bp Feature: gene Location: 6943-8526 bp Feature: domain Description: PRK06498 Location: 6946-8524 bp Feature: domain Description: PRK06498 Location: 6946-8524 bp Feature: gene Location: 8933-9454 bp Feature: domain Description: YeaK Location: 8954-9410 bp Feature: domain Description: YeaK Location: 8954-9410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), EthD (pfam07110), RVT-GII, GIIM (pfam08388), PRK06498 (isocitrate lyase; Provisional), YeaK (cd04336)