myRT

myRT report for GCA_001991415.1_ASM199141v1

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Seq: MURA01000001.1 Burkholderia cenocepacia strain VC3868 VC3868_contig-0, whole genome shotgun sequence (123975 bp)
Overview 1 RT 1: 114534-120141 bp Neighborhood of RT #1 [114534, 120263] YeaK PRK06498 RVT-GII GIIM EthD EthD SnoaL_4 Feature: gene Location: 114534-115055 bp Feature: domain Description: YeaK Location: 114555-115011 bp Feature: domain Description: YeaK Location: 1 1 4555-1 1 501 1 bp Feature: gene Location: 115462-117045 bp Feature: domain Description: PRK06498 Location: 115465-117043 bp Feature: domain Description: PRK06498 Location: 1 1 5465-1 1 7043 bp Feature: gene Location: 117644-118885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117836-118454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7836-1 1 8454 bp Feature: domain Description: GIIM Note: maturase Location: 118505-118709 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 8505-1 1 8709 bp Feature: gene Location: 118982-119698 bp Feature: domain Description: EthD Location: 119048-119234 bp Feature: domain Description: EthD Location: 1 1 9048-1 1 9234 bp Feature: domain Description: EthD Location: 119372-119645 bp Feature: domain Description: EthD Location: 1 1 9372-1 1 9645 bp Feature: gene Location: 119751-120263 bp Feature: domain Description: SnoaL_4 Location: 119772-120141 bp Feature: domain Description: SnoaL_4 Location: 1 1 9772-1 201 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeaK (cd04336), PRK06498 (isocitrate lyase; Provisional), RVT-GII, GIIM (pfam08388), EthD (pfam07110), SnoaL_4 (pfam13577)

Seq: MURA01000089.1 Burkholderia cenocepacia strain VC3868 VC3868_contig-3000008, whole genome shotgun sequence (61788 bp)
Overview 1 RT 1: 56789-61723 bp Neighborhood of RT #1 [56789, 61779] MFS_MMR_MDR_like AcrR RVT-GII GIIM COG3547 Feature: gene Location: 56789-58309 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56831-58244 bp Feature: domain Description: MFS_MMR_MDR_like Location: 56831-582 44 bp Feature: gene Location: 58455-59093 bp Feature: domain Description: AcrR Location: 58518-59079 bp Feature: domain Description: AcrR Location: 58518-59079 bp Feature: gene Location: 59183-60580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59516-60134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59516-60134 bp Feature: domain Description: GIIM Note: maturase Location: 60185-60395 bp Feature: domain Description: GIIM Note: maturase Location: 60185-60395 bp Feature: gene Location: 60745-61779 bp Feature: domain Description: COG3547 Location: 60760-61723 bp Feature: domain Description: COG3547 Location: 60760-6172 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MMR_MDR_like (cd17504), AcrR (COG1309), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MURA01000013.1 Burkholderia cenocepacia strain VC3868 VC3868_contig-12000000, whole genome shotgun sequence (263460 bp)
Overview 1 RT 1: 125888-129703 bp Neighborhood of RT #1 [125888, 129708] Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 125888-126217 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: domain Description: Histone_HNS Location: 125909-126146 bp Feature: gene Location: 126364-126570 bp Feature: gene Location: 126543-127892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127008-127644 bp Feature: gene Location: 128146-128718 bp Feature: domain Description: FIN Location: 128332-128683 bp Feature: domain Description: FIN Location: 1283 3 2-128683 bp Feature: gene Location: 128953-129708 bp Feature: domain Description: his_ut_repres Location: 129031-129703 bp Feature: domain Description: his_ut_repres Location: 12903 1-129703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)